Gene
| Gene Model ID | pfu_aug1.0_12806.1_03281 |
|---|---|
| Locus | scaffold12806.1 : 2381 ... 6505 : - |
| To GenomeBrowser | scaffold12806.1:2381..6505 |
| Genes list of scaffold | scaffold12806.1 |
| Synonym | pfu_aug2.0_4.1_13311 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12806.1_03281.t1 | 1 | 1 | TIR_2 | 33 | 141 | 5.5e-12 | 45.7 | 3.3e-15 | 1.2e-11 | 44.6 |
| pfu_aug1.0_12806.1_03281.t1 | 5 | 1 | zf-TRAF | 270 | 304 | 1.9e-12 | 47.3 | 0.00039 | 1.4 | 9.3 |
| pfu_aug1.0_12806.1_03281.t1 | 5 | 2 | zf-TRAF | 304 | 360 | 1.9e-12 | 47.3 | 2.9e-12 | 1.1e-08 | 35.3 |
| pfu_aug1.0_12806.1_03281.t1 | 5 | 3 | zf-TRAF | 381 | 430 | 1.9e-12 | 47.3 | 1.2e-05 | 0.046 | 14.1 |
| pfu_aug1.0_12806.1_03281.t1 | 5 | 4 | zf-TRAF | 402 | 457 | 1.9e-12 | 47.3 | 6.0e-08 | 0.00022 | 21.5 |
| pfu_aug1.0_12806.1_03281.t1 | 5 | 5 | zf-TRAF | 457 | 473 | 1.9e-12 | 47.3 | 0.21 | 790.0 | 0.5 |
Transcript
| Transcript ID | pfu_aug1.0_12806.1_03281.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12806.1_03281.t1 atgaccatgttatctggcattcagtcaacgacgagttccataccgaagaatttttccagttcttcgccaacaaaaaagac caaaattcctcgccgaatctttgtatcgtacgcacattcagactccgtgacggtaaatctgatcttggatgtacttcgaa actctggctgtaagatatgggatccggagggagattccatcccgggaacatacatcttgcagaatttcattgatttcgga atcgacaaaacaaacactgcagttttattcatcacgaaaaatttcctttccgacagcttttgcacattcctgggaaacca tgttatagggaaatacatcagaacagaggggcggtaccgtgtgataccggtcctgctggagaactgtaaattaccgtact accttaagtcggtgaattgtatctctctttggaggtataaaaggcagatagatctgaacaacgatcacgctgaagagtat atcgtgagggccttgtcacgaatactaaaggctatttcttcaccatcaaattcgttttggaaaatccaccgctctggaag taaaatcatcacacatggaggacggattatccacgatgttctgcagtttggtcataaactcttgtcacgcggtagaaaaa tgggaagaggggttcgggaatatatgcaaaaagaaagacttaaacgaagcattcctaaagcaaacaaatttaatcccatc aacctgctgaaaatggcagcttcgttaaaacattgtttgataagttgtaggtatggcagttgtacgtttcagacttatgg ccccgaatatgcaaaattccacgaacacttgcaaatctgtaaatttgtcccagttcattgcaattacaagggttgtaatg tagtcgcaaggcggcatgagatgtgcaaacacgaaaagaaatgtccgtttattccaatggagtgtccaaatgatggttgt aaggttaagaaagctctgtgttttctcgacgaacacatgaatcaatgcaaacatgctctggtaccctgtccattaaaggg atgcaaggtaagcgtaaagataaaagacttaaattcgcaccgatcagtgtgcgagtttcgcacaatagagatggaatcag actcagtgccagtattttcaaaattctcatgtccaaacaaagactgcgaagaaacgtttcacacgaaacagggattaaga atgcacagtactatttgtccgtatgccataataacatgtccaaatacattctgtgactataagaacaccatggcaagagt ggagagacacagagctgtagagtgtgattacagggacgttaaatgtcgggtgtgtttccaggtattaccaatgaaacact tagatcaacacaaactgacgtgtgaagctaaaataaagtgtgaaaattgtggccttcaaattcggaggtaa |
|
Protein
| Protein ID | pfu_aug1.0_12806.1_03281.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12806.1_03281.t1 MTMLSGIQSTTSSIPKNFSSSSPTKKTKIPRRIFVSYAHSDSVTVNLILDVLRNSGCKIWDPEGDSIPGTYILQNFIDFG IDKTNTAVLFITKNFLSDSFCTFLGNHVIGKYIRTEGRYRVIPVLLENCKLPYYLKSVNCISLWRYKRQIDLNNDHAEEY IVRALSRILKAISSPSNSFWKIHRSGSKIITHGGRIIHDVLQFGHKLLSRGRKMGRGVREYMQKERLKRSIPKANKFNPI NLLKMAASLKHCLISCRYGSCTFQTYGPEYAKFHEHLQICKFVPVHCNYKGCNVVARRHEMCKHEKKCPFIPMECPNDGC KVKKALCFLDEHMNQCKHALVPCPLKGCKVSVKIKDLNSHRSVCEFRTIEMESDSVPVFSKFSCPNKDCEETFHTKQGLR MHSTICPYAIITCPNTFCDYKNTMARVERHRAVECDYRDVKCRVCFQVLPMKHLDQHKLTCEAKIKCENCGLQIRR |
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