Gene
| Gene Model ID | pfu_aug1.0_1283.1_07865 |
|---|---|
| Locus | scaffold1283.1 : 1 ... 5765 : - |
| To GenomeBrowser | scaffold1283.1:1..5765 |
| Genes list of scaffold | scaffold1283.1 |
| Synonym | pfu_aug2.0_9.1_29960 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1283.1_07865.t1 | 7 | 1 | LRR_8 | 69 | 124 | 8.7e-29 | 99.0 | 1.7e-08 | 3.5e-05 | 23.4 |
| pfu_aug1.0_1283.1_07865.t1 | 2 | 1 | LRR_5 | 69 | 153 | 9.5e-10 | 38.2 | 1.0e-09 | 2.1e-06 | 27.4 |
| pfu_aug1.0_1283.1_07865.t1 | 7 | 1 | LRR_7 | 90 | 102 | 6.4e-07 | 28.5 | 0.032 | 68.0 | 4.3 |
| pfu_aug1.0_1283.1_07865.t1 | 7 | 1 | LRR_4 | 91 | 124 | 5.5e-18 | 64.1 | 2.5e-05 | 0.052 | 13.1 |
| pfu_aug1.0_1283.1_07865.t1 | 8 | 1 | LRR_1 | 91 | 110 | 8.7e-11 | 40.3 | 0.0053 | 11.0 | 6.4 |
| pfu_aug1.0_1283.1_07865.t1 | 7 | 2 | LRR_8 | 114 | 147 | 8.7e-29 | 99.0 | 1.4e-08 | 3.0e-05 | 23.6 |
| pfu_aug1.0_1283.1_07865.t1 | 7 | 2 | LRR_4 | 114 | 149 | 5.5e-18 | 64.1 | 1.7e-07 | 0.00037 | 20.0 |
| pfu_aug1.0_1283.1_07865.t1 | 8 | 2 | LRR_1 | 114 | 134 | 8.7e-11 | 40.3 | 0.012 | 25.0 | 5.4 |
| pfu_aug1.0_1283.1_07865.t1 | 7 | 2 | LRR_7 | 114 | 128 | 6.4e-07 | 28.5 | 0.12 | 250.0 | 2.6 |
| pfu_aug1.0_1283.1_07865.t1 | 8 | 3 | LRR_1 | 136 | 149 | 8.7e-11 | 40.3 | 0.00043 | 0.92 | 9.7 |
| pfu_aug1.0_1283.1_07865.t1 | 7 | 3 | LRR_7 | 136 | 147 | 6.4e-07 | 28.5 | 0.016 | 33.0 | 5.3 |
| pfu_aug1.0_1283.1_07865.t1 | 7 | 3 | LRR_8 | 164 | 210 | 8.7e-29 | 99.0 | 8.2e-05 | 0.17 | 11.6 |
| pfu_aug1.0_1283.1_07865.t1 | 7 | 3 | LRR_4 | 164 | 199 | 5.5e-18 | 64.1 | 0.0031 | 6.6 | 6.4 |
| pfu_aug1.0_1283.1_07865.t1 | 7 | 4 | LRR_8 | 188 | 244 | 8.7e-29 | 99.0 | 1.6e-05 | 0.034 | 13.8 |
| pfu_aug1.0_1283.1_07865.t1 | 8 | 4 | LRR_1 | 188 | 208 | 8.7e-11 | 40.3 | 0.13 | 270.0 | 2.2 |
| pfu_aug1.0_1283.1_07865.t1 | 7 | 4 | LRR_4 | 215 | 244 | 5.5e-18 | 64.1 | 0.46 | 970.0 | -0.5 |
| pfu_aug1.0_1283.1_07865.t1 | 7 | 5 | LRR_8 | 262 | 296 | 8.7e-29 | 99.0 | 0.016 | 33.0 | 4.3 |
| pfu_aug1.0_1283.1_07865.t1 | 7 | 5 | LRR_4 | 262 | 294 | 5.5e-18 | 64.1 | 0.0011 | 2.2 | 7.9 |
| pfu_aug1.0_1283.1_07865.t1 | 7 | 4 | LRR_7 | 262 | 278 | 6.4e-07 | 28.5 | 1.0 | 2100.0 | -0.2 |
| pfu_aug1.0_1283.1_07865.t1 | 8 | 5 | LRR_1 | 264 | 281 | 8.7e-11 | 40.3 | 0.7 | 1500.0 | 0.0 |
| pfu_aug1.0_1283.1_07865.t1 | 2 | 2 | LRR_5 | 309 | 389 | 9.5e-10 | 38.2 | 0.0016 | 3.3 | 7.4 |
| pfu_aug1.0_1283.1_07865.t1 | 7 | 6 | LRR_8 | 310 | 368 | 8.7e-29 | 99.0 | 1.3e-11 | 2.8e-08 | 33.3 |
| pfu_aug1.0_1283.1_07865.t1 | 7 | 6 | LRR_4 | 310 | 348 | 5.5e-18 | 64.1 | 3.2e-09 | 6.8e-06 | 25.5 |
| pfu_aug1.0_1283.1_07865.t1 | 8 | 6 | LRR_1 | 311 | 326 | 8.7e-11 | 40.3 | 0.014 | 30.0 | 5.1 |
| pfu_aug1.0_1283.1_07865.t1 | 7 | 5 | LRR_7 | 311 | 325 | 6.4e-07 | 28.5 | 0.084 | 180.0 | 3.0 |
| pfu_aug1.0_1283.1_07865.t1 | 7 | 6 | LRR_7 | 332 | 347 | 6.4e-07 | 28.5 | 0.0014 | 3.0 | 8.4 |
| pfu_aug1.0_1283.1_07865.t1 | 8 | 7 | LRR_1 | 333 | 348 | 8.7e-11 | 40.3 | 0.0013 | 2.8 | 8.2 |
| pfu_aug1.0_1283.1_07865.t1 | 7 | 7 | LRR_8 | 356 | 400 | 8.7e-29 | 99.0 | 4.6e-08 | 9.8e-05 | 22.0 |
| pfu_aug1.0_1283.1_07865.t1 | 8 | 8 | LRR_1 | 381 | 402 | 8.7e-11 | 40.3 | 0.0031 | 6.6 | 7.1 |
| pfu_aug1.0_1283.1_07865.t1 | 7 | 7 | LRR_7 | 381 | 396 | 6.4e-07 | 28.5 | 0.038 | 81.0 | 4.1 |
| pfu_aug1.0_1283.1_07865.t1 | 7 | 7 | LRR_4 | 382 | 400 | 5.5e-18 | 64.1 | 0.0018 | 3.7 | 7.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1283.1_07865.t1 | gi|254424572|ref|ZP_05038290.1| | 1.0e-14 |
Transcript
| Transcript ID | pfu_aug1.0_1283.1_07865.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1283.1_07865.t1 atgtatcgaatttcggcgatcatattggctgttgtatcacccattttaagtgcaagtttataccaagttctcctggagag gcgttccatatgtcaagcacctatagtaaggggtactggtcattgcagctgtgaggacgatgaattacagtgcaacgact tgtcacagcctccgacattttcatctgctgttcattatcagcaagtaatagtaatcgattcaaacctacgttcactcgga ccgaatgcctttcccagtctgaacacatcaaaactagtactgcacaattgttccctgcaatctattgacaaccatgcatt ccgaaatcttgcacaagatctgaaatcactggtcatgtctaagaaccacctggtaatattacctgacgctcttaaggact tgtcgaaactcgaggaactcgatatatctgacaataacattcccgatgatcaattcaacgaggacgtcttgcggaccctc ggatacactctgaagaagctaacattcggatccagcccagaaatagcaaactggcctcacattctaagacatttaacggt tttacaagaactcaatgtaactcgtgccgacattgaatttctaccagaaacagcttttcaaggctttgaaggtacacttt taaaattgaccataaagcataccttgcttcgatcggtaccattggctgttgcaagactgaaataccttgaagcctttaac tttgatgataatttatatgttggcgactatggggtgaatgtaccaattatctccggaatcatgccctaccttaccaacat atctttaacggatgactccctgacaactttcccagaagttcttaaagcattccaaaaactgaaagctgtagaaatgagct tgaatgatttaaaattcgtcagtgacattgctgctgatgctgtgaaacaagtcaagtatttgagcctacgtaattcaaac atcaccagagttcctgcggcactggatgacattacgtctttaatagagctggatctctctgacaataagatacatagcat cgacagaaaggacatacagattcttcctgaggtcagagatttgaagtttaacaacaatccaattctgtacatttccgacg gttccttcgactacaactaccacctcgagacactagaactccgcaatactaagttgaagaaagttccatgcgcaatagaa tccctactggaaaacattgctaatcatggcggcagatcaaactttcagtttaccatcgatctaaggggtgacgaaatcga gtgtacatgtgaattaaaatggctggaagatttggtttcaccatatcttgcgaacggaacgatgtccaggttcaacatct taggggactgccgcactgtagaatctgctatttctgactatatcatagctgatgatggcctcaagtcatgcccatcgagt ggaaaatgtagtaaccattaa |
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Protein
| Protein ID | pfu_aug1.0_1283.1_07865.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1283.1_07865.t1 MYRISAIILAVVSPILSASLYQVLLERRSICQAPIVRGTGHCSCEDDELQCNDLSQPPTFSSAVHYQQVIVIDSNLRSLG PNAFPSLNTSKLVLHNCSLQSIDNHAFRNLAQDLKSLVMSKNHLVILPDALKDLSKLEELDISDNNIPDDQFNEDVLRTL GYTLKKLTFGSSPEIANWPHILRHLTVLQELNVTRADIEFLPETAFQGFEGTLLKLTIKHTLLRSVPLAVARLKYLEAFN FDDNLYVGDYGVNVPIISGIMPYLTNISLTDDSLTTFPEVLKAFQKLKAVEMSLNDLKFVSDIAADAVKQVKYLSLRNSN ITRVPAALDDITSLIELDLSDNKIHSIDRKDIQILPEVRDLKFNNNPILYISDGSFDYNYHLETLELRNTKLKKVPCAIE SLLENIANHGGRSNFQFTIDLRGDEIECTCELKWLEDLVSPYLANGTMSRFNILGDCRTVESAISDYIIADDGLKSCPSS GKCSNH |
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