Gene
| Gene Model ID | pfu_aug1.0_1283.1_07867 |
|---|---|
| Locus | scaffold1283.1 : 8526 ... 12185 : + |
| To GenomeBrowser | scaffold1283.1:8526..12185 |
| Genes list of scaffold | scaffold1283.1 |
| Synonym | pfu_aug2.0_9.1_29961 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1283.1_07867.t1 | 6 | 1 | LRR_4 | 18 | 35 | 1.9e-16 | 59.2 | 0.13 | 270.0 | 1.3 |
| pfu_aug1.0_1283.1_07867.t1 | 4 | 1 | LRR_8 | 30 | 89 | 7.3e-26 | 89.7 | 3.2e-08 | 6.9e-05 | 22.5 |
| pfu_aug1.0_1283.1_07867.t1 | 6 | 2 | LRR_4 | 57 | 91 | 1.9e-16 | 59.2 | 2.4e-06 | 0.0051 | 16.4 |
| pfu_aug1.0_1283.1_07867.t1 | 4 | 2 | LRR_8 | 106 | 142 | 7.3e-26 | 89.7 | 3.3e-05 | 0.07 | 12.8 |
| pfu_aug1.0_1283.1_07867.t1 | 6 | 3 | LRR_4 | 110 | 142 | 1.9e-16 | 59.2 | 4.9e-07 | 0.001 | 18.6 |
| pfu_aug1.0_1283.1_07867.t1 | 4 | 3 | LRR_8 | 159 | 215 | 7.3e-26 | 89.7 | 7.7e-14 | 1.6e-10 | 40.5 |
| pfu_aug1.0_1283.1_07867.t1 | 6 | 4 | LRR_4 | 160 | 195 | 1.9e-16 | 59.2 | 2.4e-09 | 5.1e-06 | 25.9 |
| pfu_aug1.0_1283.1_07867.t1 | 6 | 5 | LRR_4 | 181 | 219 | 1.9e-16 | 59.2 | 2.9e-08 | 6.1e-05 | 22.5 |
| pfu_aug1.0_1283.1_07867.t1 | 4 | 4 | LRR_8 | 204 | 263 | 7.3e-26 | 89.7 | 3.4e-10 | 7.2e-07 | 28.8 |
| pfu_aug1.0_1283.1_07867.t1 | 6 | 6 | LRR_4 | 204 | 240 | 1.9e-16 | 59.2 | 0.0021 | 4.3 | 7.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1283.1_07867.t1 | gi|300868028|ref|ZP_07112666.1| | 1.0e-15 |
Transcript
| Transcript ID | pfu_aug1.0_1283.1_07867.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1283.1_07867.t1 atgaaagcgatgggtgattcaatgagggactttcgatttggcagccaacaacttgaagagtggccaaagacacttaacca ttttcagcagcttcagaaattggaagtggatggaatcagttctagacttcaagtcgttccaccagaaggttttcgaggat ttgaaacaacactcttagaactaaacatacatcatactagtcttataggagtccccataggcatcagcaagctaaggaac ctccaaacactgcattttgatgacaatccttatgttcaaaaccgtggtgtactggtacagtccttcccaatctttggaac cagtcataaactgagagagctaactttaaacaacgatggtttgaccaaatttcctgaagtaataaaatacctccgaggcc ttcaaagtttaagcctggatgaaaacatactagactttgtcagtgatgccaatctacttggaaacataactatcaattct ttgacattgcgaaattgtaagctgagtcgagttccaggagccctgtctgatctacagtacctaactacccttgacctgtc tgaaaatgagatatccaccattgagaagaacgatctagctggcctacgccgtctgaatcatctgatagtggcgaatacaa gcctgaagtatatctcagaggatgctttctctggattacatagtctactaagcctgaacttcaaaaattcaagcgtcact caggttccttatgccttgaattttatctccccttgtcttcaagacatatacttagaaaaaaacaaactagactgcatgtg cgaaagtctggtatggcttaagactcattcagaagcatgtgcctcacgaggtaccccaattaccattcatggggactgcg acacaatccacagcactgtcactttttatgtcaacacgttcataccaaaatgcccggaatggaaggaaatccatcacatc gcaccgtacaattaa |
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Protein
| Protein ID | pfu_aug1.0_1283.1_07867.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1283.1_07867.t1 MKAMGDSMRDFRFGSQQLEEWPKTLNHFQQLQKLEVDGISSRLQVVPPEGFRGFETTLLELNIHHTSLIGVPIGISKLRN LQTLHFDDNPYVQNRGVLVQSFPIFGTSHKLRELTLNNDGLTKFPEVIKYLRGLQSLSLDENILDFVSDANLLGNITINS LTLRNCKLSRVPGALSDLQYLTTLDLSENEISTIEKNDLAGLRRLNHLIVANTSLKYISEDAFSGLHSLLSLNFKNSSVT QVPYALNFISPCLQDIYLEKNKLDCMCESLVWLKTHSEACASRGTPITIHGDCDTIHSTVTFYVNTFIPKCPEWKEIHHI APYN |
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