Gene
| Gene Model ID | pfu_aug1.0_1283.1_07868 |
|---|---|
| Locus | scaffold1283.1 : 15236 ... 20615 : + |
| To GenomeBrowser | scaffold1283.1:15236..20615 |
| Genes list of scaffold | scaffold1283.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1283.1_07868.t1 | 2 | 1 | LRR_5 | 51 | 133 | 4.4e-07 | 29.6 | 0.0018 | 3.3 | 7.4 |
| pfu_aug1.0_1283.1_07868.t1 | 3 | 1 | LRR_9 | 53 | 136 | 3.2e-08 | 33.3 | 6.3e-06 | 0.012 | 15.2 |
| pfu_aug1.0_1283.1_07868.t1 | 7 | 1 | LRR_6 | 56 | 66 | 1.8e-10 | 39.7 | 0.0055 | 10.0 | 6.5 |
| pfu_aug1.0_1283.1_07868.t1 | 8 | 1 | LRR_7 | 56 | 67 | 2.5e-06 | 26.7 | 0.0097 | 18.0 | 6.0 |
| pfu_aug1.0_1283.1_07868.t1 | 7 | 1 | LRR_8 | 56 | 98 | 9.7e-32 | 108.5 | 1.1e-07 | 0.0002 | 21.0 |
| pfu_aug1.0_1283.1_07868.t1 | 8 | 1 | LRR_4 | 56 | 93 | 2.3e-31 | 106.8 | 0.00014 | 0.26 | 10.9 |
| pfu_aug1.0_1283.1_07868.t1 | 12 | 1 | LRR_1 | 56 | 73 | 3.1e-17 | 59.9 | 0.00017 | 0.32 | 11.1 |
| pfu_aug1.0_1283.1_07868.t1 | 7 | 2 | LRR_8 | 79 | 136 | 9.7e-32 | 108.5 | 5.6e-11 | 1.0e-07 | 31.5 |
| pfu_aug1.0_1283.1_07868.t1 | 12 | 2 | LRR_1 | 80 | 96 | 3.1e-17 | 59.9 | 0.16 | 300.0 | 2.1 |
| pfu_aug1.0_1283.1_07868.t1 | 7 | 2 | LRR_6 | 101 | 114 | 1.8e-10 | 39.7 | 0.0031 | 5.7 | 7.3 |
| pfu_aug1.0_1283.1_07868.t1 | 8 | 2 | LRR_7 | 103 | 117 | 2.5e-06 | 26.7 | 0.00044 | 0.81 | 10.1 |
| pfu_aug1.0_1283.1_07868.t1 | 8 | 2 | LRR_4 | 103 | 137 | 2.3e-31 | 106.8 | 1.4e-08 | 2.7e-05 | 23.6 |
| pfu_aug1.0_1283.1_07868.t1 | 12 | 3 | LRR_1 | 103 | 122 | 3.1e-17 | 59.9 | 6.5e-05 | 0.12 | 12.4 |
| pfu_aug1.0_1283.1_07868.t1 | 7 | 3 | LRR_6 | 124 | 136 | 1.8e-10 | 39.7 | 0.021 | 38.0 | 4.7 |
| pfu_aug1.0_1283.1_07868.t1 | 12 | 4 | LRR_1 | 126 | 138 | 3.1e-17 | 59.9 | 0.0094 | 17.0 | 5.8 |
| pfu_aug1.0_1283.1_07868.t1 | 8 | 3 | LRR_7 | 127 | 137 | 2.5e-06 | 26.7 | 0.055 | 100.0 | 3.8 |
| pfu_aug1.0_1283.1_07868.t1 | 7 | 3 | LRR_8 | 159 | 185 | 9.7e-32 | 108.5 | 0.0092 | 17.0 | 5.2 |
| pfu_aug1.0_1283.1_07868.t1 | 8 | 3 | LRR_4 | 159 | 185 | 2.3e-31 | 106.8 | 0.0023 | 4.2 | 7.0 |
| pfu_aug1.0_1283.1_07868.t1 | 7 | 4 | LRR_8 | 175 | 235 | 9.7e-32 | 108.5 | 2.1e-07 | 0.00039 | 20.1 |
| pfu_aug1.0_1283.1_07868.t1 | 12 | 5 | LRR_1 | 177 | 199 | 3.1e-17 | 59.9 | 0.23 | 440.0 | 1.6 |
| pfu_aug1.0_1283.1_07868.t1 | 8 | 4 | LRR_4 | 206 | 237 | 2.3e-31 | 106.8 | 1.1e-06 | 0.002 | 17.6 |
| pfu_aug1.0_1283.1_07868.t1 | 7 | 4 | LRR_6 | 224 | 243 | 1.8e-10 | 39.7 | 0.0015 | 2.9 | 8.2 |
| pfu_aug1.0_1283.1_07868.t1 | 8 | 4 | LRR_7 | 226 | 236 | 2.5e-06 | 26.7 | 0.14 | 270.0 | 2.5 |
| pfu_aug1.0_1283.1_07868.t1 | 12 | 6 | LRR_1 | 226 | 236 | 3.1e-17 | 59.9 | 0.11 | 200.0 | 2.6 |
| pfu_aug1.0_1283.1_07868.t1 | 8 | 5 | LRR_7 | 254 | 270 | 2.5e-06 | 26.7 | 0.34 | 620.0 | 1.4 |
| pfu_aug1.0_1283.1_07868.t1 | 7 | 5 | LRR_8 | 254 | 312 | 9.7e-32 | 108.5 | 2.5e-07 | 0.00046 | 19.8 |
| pfu_aug1.0_1283.1_07868.t1 | 3 | 2 | LRR_9 | 255 | 308 | 3.2e-08 | 33.3 | 0.08 | 150.0 | 1.8 |
| pfu_aug1.0_1283.1_07868.t1 | 8 | 5 | LRR_4 | 255 | 289 | 2.3e-31 | 106.8 | 6.4e-09 | 1.2e-05 | 24.7 |
| pfu_aug1.0_1283.1_07868.t1 | 12 | 7 | LRR_1 | 255 | 272 | 3.1e-17 | 59.9 | 0.06 | 110.0 | 3.4 |
| pfu_aug1.0_1283.1_07868.t1 | 7 | 5 | LRR_6 | 276 | 290 | 1.8e-10 | 39.7 | 0.04 | 74.0 | 3.8 |
| pfu_aug1.0_1283.1_07868.t1 | 8 | 6 | LRR_7 | 277 | 292 | 2.5e-06 | 26.7 | 0.0032 | 5.9 | 7.5 |
| pfu_aug1.0_1283.1_07868.t1 | 12 | 8 | LRR_1 | 278 | 300 | 3.1e-17 | 59.9 | 0.0064 | 12.0 | 6.4 |
| pfu_aug1.0_1283.1_07868.t1 | 2 | 2 | LRR_5 | 279 | 386 | 4.4e-07 | 29.6 | 7.5e-08 | 0.00014 | 21.5 |
| pfu_aug1.0_1283.1_07868.t1 | 7 | 6 | LRR_8 | 304 | 359 | 9.7e-32 | 108.5 | 6.6e-10 | 1.2e-06 | 28.1 |
| pfu_aug1.0_1283.1_07868.t1 | 8 | 6 | LRR_4 | 304 | 340 | 2.3e-31 | 106.8 | 1.6e-06 | 0.003 | 17.1 |
| pfu_aug1.0_1283.1_07868.t1 | 12 | 9 | LRR_1 | 304 | 320 | 3.1e-17 | 59.9 | 0.21 | 380.0 | 1.8 |
| pfu_aug1.0_1283.1_07868.t1 | 7 | 6 | LRR_6 | 324 | 336 | 1.8e-10 | 39.7 | 0.0004 | 0.75 | 10.0 |
| pfu_aug1.0_1283.1_07868.t1 | 8 | 7 | LRR_7 | 326 | 339 | 2.5e-06 | 26.7 | 0.0048 | 8.9 | 7.0 |
| pfu_aug1.0_1283.1_07868.t1 | 8 | 7 | LRR_4 | 326 | 365 | 2.3e-31 | 106.8 | 1.6e-08 | 3.1e-05 | 23.4 |
| pfu_aug1.0_1283.1_07868.t1 | 12 | 10 | LRR_1 | 326 | 347 | 3.1e-17 | 59.9 | 7.2e-05 | 0.13 | 12.3 |
| pfu_aug1.0_1283.1_07868.t1 | 3 | 3 | LRR_9 | 327 | 409 | 3.2e-08 | 33.3 | 1.3e-05 | 0.025 | 14.1 |
| pfu_aug1.0_1283.1_07868.t1 | 7 | 7 | LRR_6 | 348 | 360 | 1.8e-10 | 39.7 | 0.011 | 21.0 | 5.6 |
| pfu_aug1.0_1283.1_07868.t1 | 8 | 8 | LRR_7 | 350 | 362 | 2.5e-06 | 26.7 | 0.27 | 510.0 | 1.7 |
| pfu_aug1.0_1283.1_07868.t1 | 7 | 7 | LRR_8 | 350 | 390 | 9.7e-32 | 108.5 | 1.2e-09 | 2.3e-06 | 27.2 |
| pfu_aug1.0_1283.1_07868.t1 | 12 | 11 | LRR_1 | 350 | 369 | 3.1e-17 | 59.9 | 0.0021 | 3.8 | 7.8 |
| pfu_aug1.0_1283.1_07868.t1 | 8 | 8 | LRR_4 | 372 | 411 | 2.3e-31 | 106.8 | 2.6e-05 | 0.049 | 13.2 |
| pfu_aug1.0_1283.1_07868.t1 | 12 | 12 | LRR_1 | 373 | 390 | 3.1e-17 | 59.9 | 0.038 | 70.0 | 4.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1283.1_07868.t1 | gi|255084109|ref|XP_002508629.1| | hypothetical protein MICPUN_62214 [Micromonas sp. RCC299] | 3.0e-21 |
Transcript
| Transcript ID | pfu_aug1.0_1283.1_07868.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1283.1_07868.t1 atgatgctcatcctgatcatacagatattcatcttatgtgatgtcataatgggtcagtgttccgtcccacaatgcacctg cttaaatggctacgttgattgcagtggaaggaaattaacaaacgtaccaagctttcccacaaatatggtattttactcca catatcaaacattagatctgagcaacaataaccttactgtactacgaaatggcaattttaaccaagcaccattcaagaaa atattgcttcggaacaaccacatacgctctattgatgcacatggtttccatggagcagcaaatacattgattgaactcga tttgagcaacaatgaactccattacttaccagtagctctttcggagcttgagtctatcaagaaactagatgtatcaggga acccaatagaatatggacacaatttcaacgagagtgttatgaaatctataggggacacaattcttgaattttctttcgga ggatcaagtctttcgtcatggcctaggtctttgaaacattttccccttctgcaatcgctaacactcgatggaacaagtga tagacttacaattgtaccacctgatgggttccatggttttactacaaccatactgaaactgaatataaagaatacaaagc ttattggtgtaccattaggaatcagcaggttgagaaacctgagggaattacattttgataacaatccttatgttggtgat agaggcattttggttcagtcattccctacaggagcggcttctaatttgcacacaatgtccctgaatggagataatctaac aaaactgcctgttgttcttagatacctgccctcattgcgtaatttgagcatggacaacaatcccttgcactttataaatg acaatgaatttggagaattgagaacgataaattatctctcaatgaagaactgctctttcccacgtataccggcagcattg tctgactttaccttccttcaagaacttgacctttcttataatcacattgcaacgatagatgaaaacgatttggaagacct tcgttttctggagcatttaacgatttctaacaatgaggtgaaatacatttcgcaagacgcctttggccgtgtgcctaggt tgaagtctgtcaattttaccaatacaaatctgacatctgttcctcgaggaatcggcagggtttggccttgtatggaggat gtccacgttgaaaacaacccaatcgattgtatgtgcgaaactttggtgtggctacgtgattacagggaccagtgtagaat cgacggttatccggttcagatccatggaaagtgcgataccatctatgacgatatcgaacattacattcaagttttcattc cacattgtccagaatataaagaaattcacggaattcctccttacaattga |
|
Protein
| Protein ID | pfu_aug1.0_1283.1_07868.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1283.1_07868.t1 MMLILIIQIFILCDVIMGQCSVPQCTCLNGYVDCSGRKLTNVPSFPTNMVFYSTYQTLDLSNNNLTVLRNGNFNQAPFKK ILLRNNHIRSIDAHGFHGAANTLIELDLSNNELHYLPVALSELESIKKLDVSGNPIEYGHNFNESVMKSIGDTILEFSFG GSSLSSWPRSLKHFPLLQSLTLDGTSDRLTIVPPDGFHGFTTTILKLNIKNTKLIGVPLGISRLRNLRELHFDNNPYVGD RGILVQSFPTGAASNLHTMSLNGDNLTKLPVVLRYLPSLRNLSMDNNPLHFINDNEFGELRTINYLSMKNCSFPRIPAAL SDFTFLQELDLSYNHIATIDENDLEDLRFLEHLTISNNEVKYISQDAFGRVPRLKSVNFTNTNLTSVPRGIGRVWPCMED VHVENNPIDCMCETLVWLRDYRDQCRIDGYPVQIHGKCDTIYDDIEHYIQVFIPHCPEYKEIHGIPPYN |
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