Gene
| Gene Model ID | pfu_aug1.0_1283.1_07870 |
|---|---|
| Locus | scaffold1283.1 : 34096 ... 52167 : + |
| To GenomeBrowser | scaffold1283.1:34096..52167 |
| Genes list of scaffold | scaffold1283.1 |
| Synonym | pfu_aug2.0_9.1_29964 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1283.1_07870.t1 | 2 | 1 | CH | 1 | 96 | 2.8e-22 | 78.7 | 2.9e-14 | 8.6e-11 | 41.8 |
| pfu_aug1.0_1283.1_07870.t1 | 2 | 1 | CAMSAP_CH | 6 | 75 | 1.4e-09 | 37.4 | 8.2e-06 | 0.024 | 14.2 |
| pfu_aug1.0_1283.1_07870.t1 | 2 | 2 | CAMSAP_CH | 112 | 137 | 1.4e-09 | 37.4 | 7.7e-08 | 0.00023 | 20.7 |
| pfu_aug1.0_1283.1_07870.t1 | 2 | 2 | CH | 114 | 195 | 2.8e-22 | 78.7 | 4.9e-12 | 1.5e-08 | 34.6 |
| pfu_aug1.0_1283.1_07870.t1 | 3 | 1 | Filamin | 328 | 383 | 1.1e-14 | 54.8 | 4.1e-05 | 0.12 | 12.9 |
| pfu_aug1.0_1283.1_07870.t1 | 3 | 2 | Filamin | 385 | 466 | 1.1e-14 | 54.8 | 3.6e-11 | 1.1e-07 | 32.3 |
| pfu_aug1.0_1283.1_07870.t1 | 3 | 3 | Filamin | 542 | 568 | 1.1e-14 | 54.8 | 0.0022 | 6.6 | 7.3 |
Transcript
| Transcript ID | pfu_aug1.0_1283.1_07870.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1283.1_07870.t1 atgctggtatgggtccaggctgtcataccggaatgtaaggtcactaactttaccacagactggaacagtggcaaagctct acacgctctgctagatttttgcctaccaggtctgtgtccacattggagaaatcttgaccccaaagactcagaaaacaact gccgaaatggcatgaaaattgcccgtcagcagtttggaatacccctgatcctacgccctgaacatttatccagcccggat ttggacgaattttccttcatcacctacctctcttactttatgaaagttggtgcccctggctataatgctacattacagtg catccaaccactagtgcggaacgctcctgtctttaattttacaaccgactggaatgacggtcggttactttgtgagctgg tgaataatctgggtggagacttcaaagagtggagagattctaccgtatctaatatacaaagacttcaagatggtattgac agagctaaacgtctcggagttgaacctttgttaacagcggcggacatagctgaggaagactcggaacacctcggtgttat ggcatatgcatctaggtttataaatatcaaacctcaagcaatgtcggctttcagtaaatatgaaccagataaggtaattc tttatgaagagaaaaggcatacttcaacaatcccacgacaaataacgagcacgaaaacgatgacaaaagaatctacgtac aaaataatgacgtcagtagataatactccaatggaaaactcgaacaagagacacgtggttaatgtagtgacaaatggacc aatcaatggctcgctttcatcacttgatgatattgacatggattctaatgcaaatttgaagtatagcttagtgcgaactc cttcacttcggaggagtaagagagaatcatttgatccaagtaatggagttaaaatagacacatattctgttggagttatt ctgtcaaccacgtcacacgagatggtaagcaaggacgaagtgaaagtagaagcagagtcacctagcggcagaatcataaa aatgacgggagacggttactacaatgctcaattcgctccagacgagattggtgtttggagagtgacaatgcatgcgagag gaaaattcattgatacatgtcctgtggatgtttgtgatccttctcaagtaaaggttcttggcttgaaaggtggagtgtcc ggtagagccatcaagttcaaagttgattgcacacgggcagggaatggagagcttgaggttgttgtcaagaacaagaataa tatcactccctgctttataaccaaaactgaaaccaaaggtctttataatgtacattttactccatactcaagtggcgtat acaagatttccgtaagctttagtaaagcagaaataagggctgcacatgtcgatgtccatggaaatgataccaacctagtg gttacaacaaagacagnaccaggtgattggcagattgattacgtaacaggcggtccttttgaagtcatggtgtcggatac gttggatatcagtgtgtatagcatgcaggatggaaccgtttgtaaccgaccacacttgataggttctcctttcatacaag aaatagatgaattaatttctccaaaagcaacaggcgaaggtctgaagcgaggggctgtggaccaaccagcaagcttcaac gtagatgcccgaggatttccaggagatttacatatagatatcaagggtatctactattttgtcttctacagtgtataa |
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Protein
| Protein ID | pfu_aug1.0_1283.1_07870.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1283.1_07870.t1 MLVWVQAVIPECKVTNFTTDWNSGKALHALLDFCLPGLCPHWRNLDPKDSENNCRNGMKIARQQFGIPLILRPEHLSSPD LDEFSFITYLSYFMKVGAPGYNATLQCIQPLVRNAPVFNFTTDWNDGRLLCELVNNLGGDFKEWRDSTVSNIQRLQDGID RAKRLGVEPLLTAADIAEEDSEHLGVMAYASRFINIKPQAMSAFSKYEPDKVILYEEKRHTSTIPRQITSTKTMTKESTY KIMTSVDNTPMENSNKRHVVNVVTNGPINGSLSSLDDIDMDSNANLKYSLVRTPSLRRSKRESFDPSNGVKIDTYSVGVI LSTTSHEMVSKDEVKVEAESPSGRIIKMTGDGYYNAQFAPDEIGVWRVTMHARGKFIDTCPVDVCDPSQVKVLGLKGGVS GRAIKFKVDCTRAGNGELEVVVKNKNNITPCFITKTETKGLYNVHFTPYSSGVYKISVSFSKAEIRAAHVDVHGNDTNLV VTTKTXPGDWQIDYVTGGPFEVMVSDTLDISVYSMQDGTVCNRPHLIGSPFIQEIDELISPKATGEGLKRGAVDQPASFN VDARGFPGDLHIDIKGIYYFVFYSV |
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