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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1283.1_07872
Locus scaffold1283.1 : 58987 ... 61615 : -
To GenomeBrowser scaffold1283.1:58987..61615
Genes list of scaffold scaffold1283.1
Synonym pfu_aug2.0_9.1_29966

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1283.1_07872.t1 1 1 Scramblase 4 206 1.9e-36 125.1 3.20001e-40 2.3e-36 124.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1283.1_07872.t1 gi|196004710|ref|XP_002112222.1| hypothetical protein TRIADDRAFT_15248 [Trichoplax adhaerens] 5.0e-24

Transcript
Transcript IDpfu_aug1.0_1283.1_07872.t1
Definition-
>pfu_aug1.0_1283.1_07872.t1
atggagggtttaaacgataaaggcttcgtatacgtcaagcaacagatggagtctgatctaagaggtggatgtgggacacc
gaatacgtacaaaatcatgaatgagaatgaagaagagctgttctatgtgctggaagacgccacttgctgttgtcgatgga
gttgcggtccccagcgtcgcttccggttggatttctttacgccgcaagacgacctcgttttcactctagaccggaactgc
tgtaggtgcgactgctgttgttgtttggactgcttcctgtgtaacaacaaagtctacgtcaccgactgtacaaacaggac
tttgggatcaatcaaacagaagtttggaatattcagcggaaagtttgacgtattggattatgacggtaacatggtggcca
agatctatggaccttgctgtgtgttcagatgctgtaccgaaatctcctttgagatctacgacaagaatggcgaggagaag
ataggatccatcaataagaagtgggagggagaacaagattcatccatcaacgtggaccacgagtacttcgatatcacatt
tccggaaaagatggacccaatcgataaaatgctgatcataggtggcgcttttctcgttgtgagtatctga

Protein
Protein IDpfu_aug1.0_1283.1_07872.t1
Definition-
>pfu_aug1.0_1283.1_07872.t1
MEGLNDKGFVYVKQQMESDLRGGCGTPNTYKIMNENEEELFYVLEDATCCCRWSCGPQRRFRLDFFTPQDDLVFTLDRNC
CRCDCCCCLDCFLCNNKVYVTDCTNRTLGSIKQKFGIFSGKFDVLDYDGNMVAKIYGPCCVFRCCTEISFEIYDKNGEEK
IGSINKKWEGEQDSSINVDHEYFDITFPEKMDPIDKMLIIGGAFLVVSI

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