Gene
| Gene Model ID | pfu_aug1.0_1283.1_07874 |
|---|---|
| Locus | scaffold1283.1 : 64066 ... 84545 : - |
| To GenomeBrowser | scaffold1283.1:64066..84545 |
| Genes list of scaffold | scaffold1283.1 |
| Synonym | pfu_aug2.0_9.1_29968 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1283.1_07874.t1 | 2 | 1 | Cadherin | 143 | 160 | 7.8e-10 | 38.8 | 0.042 | 310.0 | 1.7 |
| pfu_aug1.0_1283.1_07874.t1 | 2 | 2 | Cadherin | 179 | 263 | 7.8e-10 | 38.8 | 2.5e-13 | 1.9e-09 | 37.6 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1283.1_07874.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1283.1_07874.t1 atgattataacgcaatttcgatgatcctgcggtgtattgccgggcttctcccaccggactgaattacgtcagcgtccaga cttacaccctcacagtgacgtgcaacgaaaacatcgtcacatccaataccgctacatcatcactctctataaatatcgta cagaactccgcaccgtccattacaaatctaccagatatggatcttctgtcaggttggataatttaaaaaaaaataagacc gatttttggtctggtacagcaattggtaatcctaacttcggtgtagtcgacccggatacaggggacactttgagttacgc cctcggctgcagtgatttctcttacaattctgccacggagattgtgtcgtacgccatcaattatgacgtggacactgcgg gtcatgcaacgtcacagacatgcgtggtcaccgtcaatgacggatccttgacgtccacggccacccttacaataaacgtc atcaacatcaacgacaatacgcccgtacttgacgcagcttcctatacgtatattgtagattcctctaccgcagtcggcgc cactataggaacagttactgcaactgatgctgacgcttcaccatatggtactgtgacctacacgatagaccagacgtcgc taggtaaccagtattttaccatctccagtagcggcgccatcacaacggcaacgagtttatcatcttttgccgcgggtcag tccctcagtctgacggtatcggcaaccgacagtggtggattgtcggctacgtcacccattaccattgtcattcccgccac caccactgcagggtcaacatcatcaacagaacgcaccttgtcattttttgacgactcgcgcaacattgcatggtttaccg ctgccatggtattggccgttgtagtagttgccatagcaacctacatctgtttgaagaaattcagatataagaatatgaaa aagcaatcaaaacttacagaggatcgacctgaggaatatccgggggatccttggaatccatggaaggtatgggagcataa attgtag |
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Protein
| Protein ID | pfu_aug1.0_1283.1_07874.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1283.1_07874.t1 MIITQFRXSCGVLPGFSHRTELRQRPDLHPHSDVQRKHRHIQYRYIITLYKYRTELRTVHYKSTRYGSSVRLDNLKKNKT DFWSGTAIGNPNFGVVDPDTGDTLSYALGCSDFSYNSATEIVSYAINYDVDTAGHATSQTCVVTVNDGSLTSTATLTINV ININDNTPVLDAASYTYIVDSSTAVGATIGTVTATDADASPYGTVTYTIDQTSLGNQYFTISSSGAITTATSLSSFAAGQ SLSLTVSATDSGGLSATSPITIVIPATTTAGSTSSTERTLSFFDDSRNIAWFTAAMVLAVVVVAIATYICLKKFRYKNMK KQSKLTEDRPEEYPGDPWNPWKVWEHKL |
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