Gene
| Gene Model ID | pfu_aug1.0_12831.1_03284 |
|---|---|
| Locus | scaffold12831.1 : 3357 ... 14004 : - |
| To GenomeBrowser | scaffold12831.1:3357..14004 |
| Genes list of scaffold | scaffold12831.1 |
| Synonym | pfu_aug2.0_1174.1_14837 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12831.1_03284.t1 | 2 | 1 | RabGAP-TBC | 153 | 189 | 2.2e-07 | 30.5 | 0.002 | 29.0 | 4.0 |
| pfu_aug1.0_12831.1_03284.t1 | 2 | 2 | RabGAP-TBC | 234 | 292 | 2.2e-07 | 30.5 | 6.9e-10 | 1.0e-05 | 25.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12831.1_03284.t1 | gi|291221907|ref|XP_002730961.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_12831.1_03284.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12831.1_03284.t1 atgattcctggagaaaaacagaaactgctgaaagaggctcaggcatacctcaacagtcagatgtacaaagctacaaagga ggctggttaccagaacctcataaaccaggccaacaacaggaatttagagaagttgataagagagagatttgctaaggccg ttagcaggggtatgaatgaattaaagacgtcccgagccacaacttctcctatctcaggactgatacaaacggctgttgtt gagacgtataacaagacaacaagtatggtggcttttaagagtggtgatcacatgaaggaggcagctagagcccttaatgt actctacgtttatgacaggagttacgaaccctacctcatacattggttatttcccttacaaatagcattccagactgggg cagacccttcctctgataaaggagagcatgtatatgagctggccatgtaccttgaccttttgaactctagctgctttccc acctggccacaggtatttgccgtagcagaacaggtgatgggaacgctcagtcaaagtgaccctgacctttatacacatct caaggctattgccaaaaccaatgccaaggtcaacaaaaaggaattcttggtgttcctaataagtgaagagaaatctaaag ctgaggccttactgaaggccaccccaggcagtaaacgggaggaattcatgaacaatgaactgctggcagatcccctagtc ttcctacgaaggtggataggagagggttttgtgagtgtgctggacactccagctgtgatgtatatatgggaccagtgctt catgcagggttggcagccagacgttctcaaaaacttctgtctcgctatattagaactgctgagggaacgcttcatgcacg ctagagattacatgggcatgaaggaggtgtttttcaatgagccatgtaagctatacaccatggatatacagatgtcctgg atccacctggaaaacggtaaagatctgctggaaattccctacatgaacagacagaggcctgctgtatccactgataccat gtacagtaccgattatcggattcctgatattttcatccctgattttatcattataggttctgtgttttataatagtttag cccctttgagtcgttttccaatatttatgctcactgaaaaaaatcatcattccatgtacatgtag |
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Protein
| Protein ID | pfu_aug1.0_12831.1_03284.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12831.1_03284.t1 MIPGEKQKLLKEAQAYLNSQMYKATKEAGYQNLINQANNRNLEKLIRERFAKAVSRGMNELKTSRATTSPISGLIQTAVV ETYNKTTSMVAFKSGDHMKEAARALNVLYVYDRSYEPYLIHWLFPLQIAFQTGADPSSDKGEHVYELAMYLDLLNSSCFP TWPQVFAVAEQVMGTLSQSDPDLYTHLKAIAKTNAKVNKKEFLVFLISEEKSKAEALLKATPGSKREEFMNNELLADPLV FLRRWIGEGFVSVLDTPAVMYIWDQCFMQGWQPDVLKNFCLAILELLRERFMHARDYMGMKEVFFNEPCKLYTMDIQMSW IHLENGKDLLEIPYMNRQRPAVSTDTMYSTDYRIPDIFIPDFIIIGSVFYNSLAPLSRFPIFMLTEKNHHSMYM |
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