Gene
| Gene Model ID | pfu_aug1.0_1284.1_58427 |
|---|---|
| Locus | scaffold1284.1 : 1 ... 30694 : + |
| To GenomeBrowser | scaffold1284.1:1..30694 |
| Genes list of scaffold | scaffold1284.1 |
| Synonym | pfu_aug2.0_4712.1_09368 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1284.1_58427.t1 | 2 | 1 | RIH_assoc | 201 | 235 | 1.8e-12 | 46.8 | 0.38 | 5600.0 | -3.1 |
| pfu_aug1.0_1284.1_58427.t1 | 2 | 2 | RIH_assoc | 646 | 715 | 1.8e-12 | 46.8 | 1.2e-16 | 1.8e-12 | 46.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1284.1_58427.t1 | gi|291243937|ref|XP_002741856.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1284.1_58427.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1284.1_58427.t1 gaagagaaggtgacgagattgagagacgttatagagaagtggacaggtacaaaaggagcattgaaactacacacgtggtc aacgcaaaagctcaagttgctaagagagccgtgaacagacttaaggaaatatttgagtccacatctttcctccgagactt tggacttgttgatgttctgaaggatctttcacaatatgaatacgatgaacttatacgagtctcaatgcatctcatgaacc gaaacttctctggtttggggaaactcatctcaagagctcttcaagctcaggtgataattacggagaaatctgtacaaata tgcaaaagactggaggttctgataccccgactgcgccactttactaccacagaacttaacgaagaacaagcaaaggaggt tactggaatcctggatcagatgatagaccagcaattgtatcgcaatccgaatgtcactgatcattctggaaagagggatc tcatatgcctttataagatcaccgtagcgaccgaacaatgttcagccgttatcttcactggaaacgctgatacttgcatg aaagtgacaacaaaacagattcacaagatcatgatagtgatatccaagaacaaagccaacatacctcaattgttcgaacc tctcaacgccatcatgaaaatagaggagcttgacgttccattaaagaggaatcagggatacgtcatgcagtatttcatgc agtatcgctctgagattgcttacgtcatcgatcaagacgagaaagaaagagaagttccaaaaggagaagaagaaattgca agagggaggctccattatctctttgatggctgcatggagtttcttcagaccttcgttagacagtactatcaggaagatgt cgctctgtatccagaggaaccaaaaattctagacaatctcacacatagttttaaggcttatgacgattacttcggtcagg aactagagatgaacagagagctcaatacttttgctcttaacatacaatatgcaaatgagggtgtcaataaattagaaaac gagggaaattttgatccagaacaagagttgccatcgggacaagagttcttggatcatttgaaatgtttcatagataactc aaagactgacccaaaactaagatacagactgtccgagaaactcgttaaacagctgattatttccacggggctgacacatc taagtgagacggagcgtgaggagcaagaggagttggacatccggtgcctccaactcatcagaggccttattcagctggaa atcaacaacctgccagaggactgggagggcaaccccaatagggaagtccgaaagcaactgagtataatagaaggtgtaca aaatgccttggacaaaaacaacgttgtgaccagtgtccttgaccatttgaaccgaccacaagacgaagttgtaagggaaa cactcttatgcatggcgtcattgctctttaatggaaacaacaatattcagatgagcttcattaattatttctatgggaca agagaggaaaagttcttcttcacagtaaagaagcgaatggatatggccgcctccgccattagtgagagacgaatgctgca agctatgcatcaagcaaaaatggaagaagccatgcaacaagtgaagtccttgaacagaatgcagaatggcgctccccctg aaatgaacgacaacaatccaaaatcaaaagctttgagtcgcgcagcaagttctaccatgttggcgggcccaaaaggcgga ttgacaaatggcgccattcccagcatcaacgggagtatgatgagtatagccagaacggcaaaggttgaacccgaaaaacc tgatcctaagaagaacaaacagttggtagatgatcaagagataaagcttgatgtatccctggaatcgccgtctgaccttg agttcaaggacgaatacaatattgaaactctcctgctctgcctgggattactttgtgataatcaatgtgcagaaatacag aactatctgcgagaacagccggacaatatcaagtcggccaatctggtggcagaggtgaccaagttcatgaacattctctt caccaatatcaacgaaaagtctttacctctcgtcgttcaactcttcgacacactggttgaattcacttcagaatatgtat tgaaaaaagcaattgctaccctgatcaaatccttaacagaagagaacccacctgaagagctagatggtgatgaggttgac ggcaaagcgaaaaaaggcacggatgacgagaattatcagttggtaatggacactggattctcttactaccaattgatgaa gaggaagatggatttagatgacacactgcaagttaaaaaccttatcaaaacaccggaccaaaaacaagcatgggcatact acgagcaaagtacactatccatcgaaattctgaaagacaatgtccttcaaaaactttatttcaaggtcaaggacaagaaa gtgctcagggaggaagtcaaggacattttcaattacgcagttgaccgaacgtctcctagcaacaaaataagagactttat ggactggtcaagtgatataatgaaggatattaaataccaacaaacagttcacaactctatcataggaagaaccctcgtca agttatggatacctatgaactatgcagtactgttcctcagcattgtgatcagtgttttcatcactgttgtttggagagac ccgaaaaatgctgatctaacatctgatatcaacagtttcaaaccggagtacacgatagacgaagacctgtatcagtacct gttatatggagtagggggagtccataatttcctttgtctttgcgttctgataacattcttcctgtccaaccaaccctcct ttccaccataccgatggctgaaaacaaaacttgggaaatcgacaaagacatgcaaaggagatgtttcatttgcagcagag aaagctatgattttgagagacatggaggcgtaa |
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Protein
| Protein ID | pfu_aug1.0_1284.1_58427.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1284.1_58427.t1 REGDEIERRYREVDRYKRSIETTHVVNAKAQVAKRAVNRLKEIFESTSFLRDFGLVDVLKDLSQYEYDELIRVSMHLMNR NFSGLGKLISRALQAQVIITEKSVQICKRLEVLIPRLRHFTTTELNEEQAKEVTGILDQMIDQQLYRNPNVTDHSGKRDL ICLYKITVATEQCSAVIFTGNADTCMKVTTKQIHKIMIVISKNKANIPQLFEPLNAIMKIEELDVPLKRNQGYVMQYFMQ YRSEIAYVIDQDEKEREVPKGEEEIARGRLHYLFDGCMEFLQTFVRQYYQEDVALYPEEPKILDNLTHSFKAYDDYFGQE LEMNRELNTFALNIQYANEGVNKLENEGNFDPEQELPSGQEFLDHLKCFIDNSKTDPKLRYRLSEKLVKQLIISTGLTHL SETEREEQEELDIRCLQLIRGLIQLEINNLPEDWEGNPNREVRKQLSIIEGVQNALDKNNVVTSVLDHLNRPQDEVVRET LLCMASLLFNGNNNIQMSFINYFYGTREEKFFFTVKKRMDMAASAISERRMLQAMHQAKMEEAMQQVKSLNRMQNGAPPE MNDNNPKSKALSRAASSTMLAGPKGGLTNGAIPSINGSMMSIARTAKVEPEKPDPKKNKQLVDDQEIKLDVSLESPSDLE FKDEYNIETLLLCLGLLCDNQCAEIQNYLREQPDNIKSANLVAEVTKFMNILFTNINEKSLPLVVQLFDTLVEFTSEYVL KKAIATLIKSLTEENPPEELDGDEVDGKAKKGTDDENYQLVMDTGFSYYQLMKRKMDLDDTLQVKNLIKTPDQKQAWAYY EQSTLSIEILKDNVLQKLYFKVKDKKVLREEVKDIFNYAVDRTSPSNKIRDFMDWSSDIMKDIKYQQTVHNSIIGRTLVK LWIPMNYAVLFLSIVISVFITVVWRDPKNADLTSDINSFKPEYTIDEDLYQYLLYGVGGVHNFLCLCVLITFFLSNQPSF PPYRWLKTKLGKSTKTCKGDVSFAAEKAMILRDMEA |
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