Gene
| Gene Model ID | pfu_aug1.0_1285.1_07877 |
|---|---|
| Locus | scaffold1285.1 : 3526 ... 25342 : + |
| To GenomeBrowser | scaffold1285.1:3526..25342 |
| Genes list of scaffold | scaffold1285.1 |
| Synonym | pfu_aug2.0_383.1_10711 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1285.1_07877.t1 | 2 | 1 | Thiolase_N | 52 | 238 | 0.0 | 255.0 | 0.0 | 0.0 | 193.0 |
| pfu_aug1.0_1285.1_07877.t1 | 2 | 2 | Thiolase_N | 241 | 291 | 0.0 | 255.0 | 2.5e-20 | 9.3e-17 | 60.8 |
| pfu_aug1.0_1285.1_07877.t1 | 1 | 1 | Thiolase_C | 299 | 421 | 2.8026e-45 | 152.4 | 0.0 | 8.40779e-45 | 151.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1285.1_07877.t1 | gi|57529492|ref|NP_001006571.1| | 3-ketoacyl-CoA thiolase, mitochondrial [Gallus gallus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 2 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1285.1_07877.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1285.1_07877.t1 atgggtatattatgtacgttcgtagcttcaaaactaacggccaacacccagaaacaaaaacaagttggcctgtttcggtc tattcgtgtagtcttcgatcagggcaacgcaaatattcagtcagtgtcaccgacgagggtacgagctgtttcgggcgtgt ttattgtggctgcaaagcggacagcatttgggacatatggtggaaagcttgtaggaaaatctgccacagatctgatggag gtagcctccaaagcagcactccaggcaggaaaagtcaaccctgaaatcatcaactctgtcattgttggaaatgttttgac atcatcaactgatggtatttatattgctcgtcatgtgggtctgaagtgtggtgtaccaatagacgtgcctgcccttactg tcaacagactctgtggatcagggttccaggcaatcatcaatggagctcaggaaatcatgcttggagagagccaggtggca ttagtaggaggcagtgataacatgagtcaagctccatatgcagtccgcaatgttagatttggtactaagttaggcatgca actaaagttagaggacaccatgtgggaagccctgacagattcctatacaggcttacctatggccatcacagcagagaatc tagcggagcagtatggtctctccaggcaagactgtgacaattatgccttacagactcaacaaagatgggcagcaggacca gaaacatttgaagttgatgaacatccaaaaccaaagtcaacacctgaaaacttggctaaactccctccagtttttaaaaa ggatggtacagttactgctggcaatgcctctggtgtatgtgacggggcagcagctttagttatagccagtgaagcagcag tcaaacaacataaccttacacctttagctaggcttgtctcttatggaatttcaggttgtgaccctaagataatgggtata ggtccagccccctcatctagggcagcattgaaggcagctggtaaagatgtcaaagacatgcaaattgtggaggtgaatga ggcttttgcaccccagtatttggctgtggagaaggagctgggtctgaatagagagataaccaacatgaacggaggagcca ttgccctaggacatccattagcagcttcaggagccagaataacgggtcatcttacacatgaactacagaggcagaacaaa cagtttgctttaggaacagcctgtataggtggaggacagggcattgcagtgattttggaaaaatgctga |
|
Protein
| Protein ID | pfu_aug1.0_1285.1_07877.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1285.1_07877.t1 MGILCTFVASKLTANTQKQKQVGLFRSIRVVFDQGNANIQSVSPTRVRAVSGVFIVAAKRTAFGTYGGKLVGKSATDLME VASKAALQAGKVNPEIINSVIVGNVLTSSTDGIYIARHVGLKCGVPIDVPALTVNRLCGSGFQAIINGAQEIMLGESQVA LVGGSDNMSQAPYAVRNVRFGTKLGMQLKLEDTMWEALTDSYTGLPMAITAENLAEQYGLSRQDCDNYALQTQQRWAAGP ETFEVDEHPKPKSTPENLAKLPPVFKKDGTVTAGNASGVCDGAAALVIASEAAVKQHNLTPLARLVSYGISGCDPKIMGI GPAPSSRAALKAAGKDVKDMQIVEVNEAFAPQYLAVEKELGLNREITNMNGGAIALGHPLAASGARITGHLTHELQRQNK QFALGTACIGGGQGIAVILEKC |
|