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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1286.1_36923
Locus scaffold1286.1 : 3073 ... 8965 : -
To GenomeBrowser scaffold1286.1:3073..8965
Genes list of scaffold scaffold1286.1
Synonym pfu_aug2.0_133.1_10332

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1286.1_36923.t1 1 1 Lipocalin 13 78 2.8e-09 37.0 6.7e-13 3.3e-09 36.8

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1286.1_36923.t1 gi|224060506|ref|XP_002188231.1| 2.0e-11

Transcript
Transcript IDpfu_aug1.0_1286.1_36923.t1
Definition-
>pfu_aug1.0_1286.1_36923.t1
atggtaaattcggtggtctattctcccatagccgccgattactgggtacttgacacagactatacgaattacacgctgat
ttattcctgcctgaacatatttggaatcgaaaaaattgagtttggttggattctcagcaggaagtcaacccttgacagcg
ctatttcaaccaaacttcaatcaatattgaaaggatacaaagtcgacacggataagcttatttttcaggatcagtcttgc
aaatga

Protein
Protein IDpfu_aug1.0_1286.1_36923.t1
Definition-
>pfu_aug1.0_1286.1_36923.t1
MVNSVVYSPIAADYWVLDTDYTNYTLIYSCLNIFGIEKIEFGWILSRKSTLDSAISTKLQSILKGYKVDTDKLIFQDQSC
K

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