Gene
| Gene Model ID | pfu_aug1.0_12886.1_32269 |
|---|---|
| Locus | scaffold12886.1 : 1 ... 9355 : - |
| To GenomeBrowser | scaffold12886.1:1..9355 |
| Genes list of scaffold | scaffold12886.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12886.1_32269.t1 | 1 | 1 | Ets | 222 | 285 | 1.7e-19 | 69.7 | 7.8e-23 | 3.8e-19 | 68.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12886.1_32269.t1 | gi|348505946|ref|XP_003440521.1| | PREDICTED: ETS homologous factor-like isoform X1 [Oreochromis niloticus] | 1.0e-18 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 4 |
Transcript
| Transcript ID | pfu_aug1.0_12886.1_32269.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12886.1_32269.t1 atgatgtcactggaagaggagacaatccagctagaacgatgtgccagtccagacattgaatggttgtctaggattttgtc accggaaattttctcgttagaagccgactctaatttgtgtcatagtcacgatggaacaaaaaggaaaatgttgaagttaa aaagtggataccatggtcatagggaagagagattgagaaggctaggtttgcttcctggaggttacgatcacacggtaact tttcctcccagttatgatccccagatgattatcccaaaacaggaagttatagatgatgagtactatatgaaaccagatca ggatgaggaggatgaagaagaaagaaactacatagatcttagtgaaacaggacagaccagtgtaaagccaaatgatctta aggtgtccgtggatgatgacaagggggtagtggtggagatgtacggaatgagctatccaatagacatatcaactgactta caatccgagtcagcagctaaagcatcaagtattttacataacatgaacacaacaagaatgagaggagtgtttgacaataa caacgagtacaagtgttcagtcattgaaccagtttgtaggaaaaaggcagctaaaaattcctcaaggaactatccaagat ttaaaagattaccacgtggttgccgtctctgggagttcatccgggaccttctgcataatcctcggtacaacccctcacat atcagatggacagacatatcacgtggtgaatttagactaatcaaaactcacgatattgctcgaatgtggggtgaaaagaa aaacaacgagggaatgacttatgagaaactgagtagggctatgagatataacactgaatgggatgggacgtaa |
|
Protein
| Protein ID | pfu_aug1.0_12886.1_32269.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12886.1_32269.t1 MMSLEEETIQLERCASPDIEWLSRILSPEIFSLEADSNLCHSHDGTKRKMLKLKSGYHGHREERLRRLGLLPGGYDHTVT FPPSYDPQMIIPKQEVIDDEYYMKPDQDEEDEEERNYIDLSETGQTSVKPNDLKVSVDDDKGVVVEMYGMSYPIDISTDL QSESAAKASSILHNMNTTRMRGVFDNNNEYKCSVIEPVCRKKAAKNSSRNYPRFKRLPRGCRLWEFIRDLLHNPRYNPSH IRWTDISRGEFRLIKTHDIARMWGEKKNNEGMTYEKLSRAMRYNTEWDGT |
|