Gene
| Gene Model ID | pfu_aug1.0_12916.1_46570 |
|---|---|
| Locus | scaffold12916.1 : 6856 ... 16335 : - |
| To GenomeBrowser | scaffold12916.1:6856..16335 |
| Genes list of scaffold | scaffold12916.1 |
| Synonym | pfu_aug2.0_257.1_23757 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12916.1_46570.t1 | 1 | 1 | RHINO | 2 | 274 | 2.5e-15 | 56.9 | 2.5e-17 | 3.7e-13 | 49.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_12916.1_46570.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12916.1_46570.t1 atgcctaggaaacgtcgtaagtcatgtgtgaataaagaacctttgatcttcactgaaagtccagtgagtaagcagagaaa tttaccaacacctgtatactgtgctagacacccagccactgtgtgtagtgtaccagtagaggaagcaacaagctttactt gggtttctccccagttcaggtcagctcctgccagtgctaaaggacttaggagaagtcgacgtcgtaagaaaagcctatct gggccagccattcaaaagccatgtacttgtcatcatggattgtcagtaaattctgcgagtaaaacaggaagcagaaaatc aaaattcaaaccattactgtttatgggtgatgatactccgggtcaaactgtcatccaggacattgatgtaacagatgatt cttgtatgaacggcgatttagatcattcaagaaatgtaactgaaacgggtaaaggcaaggggagaagatgtagtcctcgt aatgccaaaactgctgtcaatgactcggtgtgctgtgataatgacctttcttatttatcggtttctactcctggtcatga ccaggaaaacatcgctccatccaatcaaaacctgtgttcaaatcaacctcctgtgaaaaacttattctgtgacatgaata atgcgacaagtcctaaaatgagacctaaaaatagacataaaaatgtaaggtcaaggttattacagaatttagaagcatcc gtaagtgaggattggtcacaaaggacaatgttaatatcggaccatgtgctagtaccagacactccagaggctgaatatgg catgtgtaatagactcaggcggcttaaacgtcataaacatcgaggaaaaaattaa |
|
Protein
| Protein ID | pfu_aug1.0_12916.1_46570.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12916.1_46570.t1 MPRKRRKSCVNKEPLIFTESPVSKQRNLPTPVYCARHPATVCSVPVEEATSFTWVSPQFRSAPASAKGLRRSRRRKKSLS GPAIQKPCTCHHGLSVNSASKTGSRKSKFKPLLFMGDDTPGQTVIQDIDVTDDSCMNGDLDHSRNVTETGKGKGRRCSPR NAKTAVNDSVCCDNDLSYLSVSTPGHDQENIAPSNQNLCSNQPPVKNLFCDMNNATSPKMRPKNRHKNVRSRLLQNLEAS VSEDWSQRTMLISDHVLVPDTPEAEYGMCNRLRRLKRHKHRGKN |
|