Gene
Gene Model ID | pfu_aug1.0_12931.1_25105 |
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Locus | scaffold12931.1 : 4585 ... 14113 : + |
To GenomeBrowser | scaffold12931.1:4585..14113 |
Genes list of scaffold | scaffold12931.1 |
Synonym | pfu_aug2.0_14217.1_26475 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_12931.1_25105.t1 | 3 | 1 | Glyco_hydro_18 | 1 | 131 | 0.0 | 275.7 | 0.0 | 2.90069e-42 | 145.3 |
pfu_aug1.0_12931.1_25105.t1 | 3 | 2 | Glyco_hydro_18 | 137 | 230 | 0.0 | 275.7 | 1.4e-29 | 7.0e-26 | 91.4 |
pfu_aug1.0_12931.1_25105.t1 | 3 | 3 | Glyco_hydro_18 | 278 | 324 | 0.0 | 275.7 | 2.4e-13 | 1.2e-09 | 38.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_12931.1_25105.t1 | gi|332811669|ref|XP_514112.3| | 7.0e-40 |
Transcript
Transcript ID | pfu_aug1.0_12931.1_25105.t1 |
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Definition | - |
>pfu_aug1.0_12931.1_25105.t1 atggttgctacagacgctacaagacgtgcctttgcaacagacgcagtaaaattcctcaggaaacacaactttgatggcct tgaccttgactgggaatatcccggaaatcgtggtagccctgccagtgacaaagataaatatacagaacttgtaaaggtgt tgaactccgaattgaagaaggaggctcagactagtggaaaagatcaactaattctcagtgcagccattccagcaggcaaa tcaaatattgaccctggatacaacgttccagaaatatcaaaatacgtggacatgttgaatttgatgacatatgacttaca cggaggatcttgggaagacgtgaccggtcataatgcccctctacatcaatctccaaaggacaagggaaataacaccatgc tcaacgtgatggttgctacagacgctacaagacgtgcttttgcaacagacgcagtgaaattcctcaggaaacacaacttt gatggccttgaccttgactgggagtatcccggaaatcgtggcagccctgccagtgacaaagataaatataccgaacttgt taaggtgttgaactccgaatttaagaaggaggctcagactagtggaaaagatcaactaattctcagtgcagccattccag cagggaaatcaaatattgaccctggatacaacgttccagaaatatcaaaacccgtagcgcagacgaccaagggtgcagct ccaacaaataagcagacgacacctggatctggatcaggtccacttgtccaaagcacaacatcagcaccgtcacctgcttg tgtaaatactggtggtggaaacagcagcggtaaaagaagcgtttgctactacgctaactgggcacaatacaggagcgctc cagccaaattcctgcccgagaacattgatcctacgctttgtacccatgtcatatactccttcgctaaactggtcaacaac caccttgcaccatttgaaacgaacgacgaaagtaaaggaggcaccaagggcatgtaa |
Protein
Protein ID | pfu_aug1.0_12931.1_25105.t1 |
---|---|
Definition | - |
>pfu_aug1.0_12931.1_25105.t1 MVATDATRRAFATDAVKFLRKHNFDGLDLDWEYPGNRGSPASDKDKYTELVKVLNSELKKEAQTSGKDQLILSAAIPAGK SNIDPGYNVPEISKYVDMLNLMTYDLHGGSWEDVTGHNAPLHQSPKDKGNNTMLNVMVATDATRRAFATDAVKFLRKHNF DGLDLDWEYPGNRGSPASDKDKYTELVKVLNSEFKKEAQTSGKDQLILSAAIPAGKSNIDPGYNVPEISKPVAQTTKGAA PTNKQTTPGSGSGPLVQSTTSAPSPACVNTGGGNSSGKRSVCYYANWAQYRSAPAKFLPENIDPTLCTHVIYSFAKLVNN HLAPFETNDESKGGTKGM |