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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_12933.1_39418
Locus scaffold12933.1 : 11448 ... 18465 : -
To GenomeBrowser scaffold12933.1:11448..18465
Genes list of scaffold scaffold12933.1
Synonym pfu_aug2.0_352.1_07391

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_12933.1_39418.t1 2 1 GMC_oxred_N 1 63 3.4e-09 36.3 9.1e-10 3.4e-06 26.4
pfu_aug1.0_12933.1_39418.t1 2 2 GMC_oxred_N 68 85 3.4e-09 36.3 0.0003 1.1 8.3
pfu_aug1.0_12933.1_39418.t1 1 1 GMC_oxred_C 193 233 9.8e-08 32.4 5.1e-11 1.9e-07 31.4

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_12933.1_39418.t1 gi|31202783|ref|XP_310340.1| AGAP003788-PA [Anopheles gambiae str. PEST] 5.0e-19

Transcript
Transcript IDpfu_aug1.0_12933.1_39418.t1
Definition-
>pfu_aug1.0_12933.1_39418.t1
ttggtgcaggacctgcagggtcagtacttgccaatcgactgtctgaagagaacgccacagttctattactagaagcaggc
gacgatgaaaccaaccaaccgatgtacgatataccatttaatgcggctgcagcacagcagactagtgctgattggcagta
caaaactgtccctcagaaattctcccaaaaaggaatgatcaaacagattccagtaatatcagatttgccagtaggaaaca
acctgaatgatcacatgatgttttatgttcccgcctccctggataaaccactcagcctgaccaatgagcgagtcaacacc
acgtggaataacctcatataccacgtgttcaaaacaggtatattgaccagtaatgctggtgttgaggctacggggtttat
acgtgccatgccaaagaaaccaggtgataggtcaccagatgtccagtttatcttggtcagttctttggccgaacaaggag
acgaatataaccatttcaatcgcaaaaaggaagtcatcaatggatttcaaacagcgatgactccagaagggttctcaatt
gctgttttactattaaagccaaaaagtagaggaacgatacgattacaaagtgacgatccgttcgattaccctcggattaa
tcctcgttatttagaggaaaaagctgatgttcaaacatatatcgaaggataccaattacttacattgcattaccttatta
tggaatcctgtttggacccctttgcatcatcgtaccatcgccggcgatgtaacgatggcgatggcacgatgatgcgatgt
tacgatggcgatgttacgaagccacgatggcgaagatacgatgttacgatggcgaagatacgaagtcacaatggcgatga
tgcgatgttcacatcgtatcatcgccatcgtatcatcgccatcgtatcatcgccatcgtatcatcgccatcgtagcatcg
tgtcatcgccatcgtaa

Protein
Protein IDpfu_aug1.0_12933.1_39418.t1
Definition-
>pfu_aug1.0_12933.1_39418.t1
GAGPAGSVLANRLSEENATVLLLEAGDDETNQPMYDIPFNAAAAQQTSADWQYKTVPQKFSQKGMIKQIPVISDLPVGNN
LNDHMMFYVPASLDKPLSLTNERVNTTWNNLIYHVFKTGILTSNAGVEATGFIRAMPKKPGDRSPDVQFILVSSLAEQGD
EYNHFNRKKEVINGFQTAMTPEGFSIAVLLLKPKSRGTIRLQSDDPFDYPRINPRYLEEKADVQTYIEGYQLLTLHYLIM
ESCLDPFASSYHRRRCNDGDGTMMRCYDGDVTKPRWRRYDVTMAKIRSHNGDDAMFTSYHRHRIIAIVSSPSYHRHRSIV
SSPS

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