Gene
| Gene Model ID | pfu_aug1.0_12957.1_61118 |
|---|---|
| Locus | scaffold12957.1 : 1896 ... 9544 : + |
| To GenomeBrowser | scaffold12957.1:1896..9544 |
| Genes list of scaffold | scaffold12957.1 |
| Synonym | pfu_aug2.0_80.1_00198 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12957.1_61118.t1 | 1 | 1 | Sugar_tr | 3 | 165 | 1.5e-10 | 40.3 | 2.4e-14 | 1.8e-10 | 40.0 |
| pfu_aug1.0_12957.1_61118.t1 | 1 | 1 | MFS_1 | 33 | 177 | 8.3e-11 | 41.1 | 1.3e-14 | 9.9e-11 | 40.9 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_12957.1_61118.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12957.1_61118.t1 atggtatattatggtctgtcgctgggaacggataacttgggaggggatccttacattaactttctgattgccggtgccgt tgagataccagcctaccttctgtgtgtcctctgtctgaacagacttggtagaagatggcctctggctctcacaatgattg taggtggtgcttgctgtatagcctccggattcatcccagattcatcaggactcctcccattgaagatcacccttgcaatg tttggtaaatttgggatcaccgcatcatacgcaatcatctatctcatggctgctgaagttttccctactgtcgtcagaaa cattggaatgggtgtttcatctatgtgtgctagaattggaggtatgttgtcgccgcagatattggagttacagaatatct gggtcccccttcctctaatagtgttcggtgccttgtctgcattagctggattccttgccctcctattaccagagactgct ggcagacccctacctcagcttatagaggatgtcacaaaacccaaacagacacggctcaaagtgagctattgtcataccgg tttgtccgtcgtccgtctgtccgtttacttttcacatgttcgacttctctggaaccgcttggaggattttgatgaaactt ggtatgcatga |
|
Protein
| Protein ID | pfu_aug1.0_12957.1_61118.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12957.1_61118.t1 MVYYGLSLGTDNLGGDPYINFLIAGAVEIPAYLLCVLCLNRLGRRWPLALTMIVGGACCIASGFIPDSSGLLPLKITLAM FGKFGITASYAIIYLMAAEVFPTVVRNIGMGVSSMCARIGGMLSPQILELQNIWVPLPLIVFGALSALAGFLALLLPETA GRPLPQLIEDVTKPKQTRLKVSYCHTGLSVVRLSVYFSHVRLLWNRLEDFDETWYA |
|