Gene
| Gene Model ID | pfu_aug1.0_12957.1_61120 |
|---|---|
| Locus | scaffold12957.1 : 25130 ... 27725 : - |
| To GenomeBrowser | scaffold12957.1:25130..27725 |
| Genes list of scaffold | scaffold12957.1 |
| Synonym | pfu_aug2.0_80.1_00199 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12957.1_61120.t1 | 1 | 1 | DUF563 | 296 | 524 | 3.7e-24 | 85.7 | 4.5e-28 | 6.7e-24 | 84.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12957.1_61120.t1 | gi|226482514|emb|CAX73856.1| | glycoprotein 2-beta-D-xylosyltransferase [Schistosoma japonicum] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_12957.1_61120.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12957.1_61120.t1 atgcacattgtctttctagagatcagatggaaagccatggctaggtccctccctcgtcgcctcctaacgttctgttgtgg atacagattattgctgatcttcctggaatttgttttacattcatcagtgcggattcgaaccatgatatctacagtacgac tacagcagattctgactgtaggactgttaacatacctgtacatgacagtcctcttcatgtttcagaatagtcgatattcc acgtggcagaggtactataggaacctctcaaatgacagccttcccgaggaggtgtacctcagtaatattacaggtgtgga ttataattactttgaaattccttcggaaaaagtatattacgaatataagaaggcagagatagattatcctgatagcaaag tttcaaaagtaaatgtgccgcaggttaaaatacccatcgttgcaagtttgaattcaaaaataacaacagtgaaaatttca aaatatgaatatcttaataaaaaatttgctttgaatgaatatcctgtatctaattggataagtaatcacgtatctctgtg cgatagtaaattccaaggatatgataataaattcgcgcgctttagtgacgtaattctagatccaaaacactgcaaagggc gtcgaggtggagaggatatgtggacggttatgaaacagcccgaaagtgacgaatatttgaaactgaaatttggttatttc cgtatgaattgtggcggtaaaacgttatactataaattcagtccaaaagaccatctgatgtcatggatggcatcaacaaa aagttcaactggagtaaatctgagagaggaaaatatagattatgttgataaattcacgatcgccataactcgttatgaat acgtgaatatgtatcacacgatgacagatttttacaatgctttcctcatgctactgatattcaatcaggatccatcagat gtgaacattctgtgggtagacgcccatccgaaaggcggccttgactcgatatggtcaaacttgttcgggaacgtcctgag ggcaggcgatctacacgaaaagaccaagttccgtgatcttgtttggggtataacgggatataacagcttgttaaacaatc atgattacccagttgtcccatatctggaggaattcagggacttcttcctaaatcaacacggagtttccaacaaaaagtca ttaaattgtgctactgtatctatgttgatcatttggagaagaggatatgtcgctcatccaaggaatccacgtggcaaagt tggcaggaaaattaaaaatgagaaggaactggaaacgtctctaaaacgttcctttcctcagcatattgtccgtggagaac agttggacacgatggacattaaagaacagctaaatctcatatcgcgcaccgacatccttataggcatgcatggcgcaggc ctgtctatgacgctcttcctgccgcggcatgccggcgtcgtggagttgtaccctaggtattggtccacagcaaataaaca tttcaaagccatggctgcatggagaaagcttcattacagacaatggcaaaatagagacagaaaaagagagtttcctgacc aatttacttatattccaccggaagtgcttatcaaaatggtccaaagtgtgctagaaaaaatgtgtccccaatatgattca atagcttcctga |
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Protein
| Protein ID | pfu_aug1.0_12957.1_61120.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12957.1_61120.t1 MHIVFLEIRWKAMARSLPRRLLTFCCGYRLLLIFLEFVLHSSVRIRTMISTVRLQQILTVGLLTYLYMTVLFMFQNSRYS TWQRYYRNLSNDSLPEEVYLSNITGVDYNYFEIPSEKVYYEYKKAEIDYPDSKVSKVNVPQVKIPIVASLNSKITTVKIS KYEYLNKKFALNEYPVSNWISNHVSLCDSKFQGYDNKFARFSDVILDPKHCKGRRGGEDMWTVMKQPESDEYLKLKFGYF RMNCGGKTLYYKFSPKDHLMSWMASTKSSTGVNLREENIDYVDKFTIAITRYEYVNMYHTMTDFYNAFLMLLIFNQDPSD VNILWVDAHPKGGLDSIWSNLFGNVLRAGDLHEKTKFRDLVWGITGYNSLLNNHDYPVVPYLEEFRDFFLNQHGVSNKKS LNCATVSMLIIWRRGYVAHPRNPRGKVGRKIKNEKELETSLKRSFPQHIVRGEQLDTMDIKEQLNLISRTDILIGMHGAG LSMTLFLPRHAGVVELYPRYWSTANKHFKAMAAWRKLHYRQWQNRDRKREFPDQFTYIPPEVLIKMVQSVLEKMCPQYDS IAS |
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