Gene
| Gene Model ID | pfu_aug1.0_12957.1_61121 |
|---|---|
| Locus | scaffold12957.1 : 32606 ... 35702 : + |
| To GenomeBrowser | scaffold12957.1:32606..35702 |
| Genes list of scaffold | scaffold12957.1 |
| Synonym | pfu_aug2.0_80.1_00200 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12957.1_61121.t1 | 1 | 1 | 7TM_GPCR_Srx | 32 | 154 | 3.1e-06 | 26.4 | 2.1e-09 | 4.4e-06 | 26.0 |
| pfu_aug1.0_12957.1_61121.t1 | 1 | 1 | 7TM_GPCR_Srsx | 33 | 141 | 1.3e-10 | 40.8 | 7.7e-14 | 1.6e-10 | 40.5 |
| pfu_aug1.0_12957.1_61121.t1 | 1 | 1 | 7tm_1 | 40 | 157 | 4.0e-28 | 98.2 | 2.6e-31 | 5.6e-28 | 97.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12957.1_61121.t1 | gi|171850884|emb|CAP17415.1| | G Protein coupled receptor [Crassostrea gigas] | 3.0e-31 |
Transcript
| Transcript ID | pfu_aug1.0_12957.1_61121.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12957.1_61121.t1 atgattgctcaaaattctactattacagatttggtgccccttgcatttgtttcaagggagcgaagtctaccgaccatcgt agttaacgccgttcttttcgtggttggttttatagctaacttaacggtgtttgttactttgttcaggaaccgtaaatccc agtcacggtgtaaccgatttatcctccacctatcctttgccgaccttgccgtgataaccatcgtgccaccaacagaaatc gcctggcactccagcatcacctgggattacggaaactttgcatgtaaactgtacaagtttgcttacatatttggacagaa tgctacatcttttattttgatcatgatcagcatagaccggtttattgccatcgtgtaccctatggttctgcccagtgtca gtaagaggaacagtcgtatcatgttagctacagcctggatcctcagtttcctggccagcattcctcaaatgaaaagaaaa acattgcaaccaatagcatttcgttgttaa |
|
Protein
| Protein ID | pfu_aug1.0_12957.1_61121.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12957.1_61121.t1 MIAQNSTITDLVPLAFVSRERSLPTIVVNAVLFVVGFIANLTVFVTLFRNRKSQSRCNRFILHLSFADLAVITIVPPTEI AWHSSITWDYGNFACKLYKFAYIFGQNATSFILIMISIDRFIAIVYPMVLPSVSKRNSRIMLATAWILSFLASIPQMKRK TLQPIAFRC |
|