Gene
| Gene Model ID | pfu_aug1.0_1298.1_29661 |
|---|---|
| Locus | scaffold1298.1 : 12526 ... 31123 : + |
| To GenomeBrowser | scaffold1298.1:12526..31123 |
| Genes list of scaffold | scaffold1298.1 |
| Synonym | pfu_aug2.0_33.1_10149 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1298.1_29661.t1 | 1 | 1 | HYR | 227 | 313 | 5.9e-17 | 61.4 | 1.3e-19 | 1.5e-16 | 60.1 |
| pfu_aug1.0_1298.1_29661.t1 | 1 | 1 | GCC2_GCC3 | 494 | 532 | 1.1e-07 | 31.3 | 3.7e-10 | 4.2e-07 | 29.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1298.1_29661.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1298.1_29661.t1 atgcgctcaatagatgcagtagcccaagagatgatatacttcagtgatgctgctatgatggctatatacagctgtaaaat agacggcagtgaactgagggaaatactcaactcctctaacggtataggccaagtggaaggtctagccatagattttgagc agaggcggctttactacactaacactggatatcaagagaaagggggcgttcatttctggcacgcaatagaaatggtggat ctggaagacaccaataaacgacgtcgtgtgttaacagctgtggagagacccagagcgctatatatagattctgacagcag gaaaacaatctaccgagctaactttgatggcaccaatgttgaagaattttacacggtaaatgaccacagtgttgtcagcc tggcattgtatggtggctccctctactggacagctactatttcaaatgcacctaacacggtcatagaggtcaaccttcca agtgatagcaatgctacgacctttgacctcaacagcttaggtctctctaacgtcatggcaaccagctgttcaggacaacc acttccaattgttttatcaatgacaaaactttattggagaaaagacgcacagacgatacagcttgtagcgagtgacaaac aaggcacgacaacggcaaatgtcagagtaaaggtcaaagatgtgacacctcctaccattgaaaactgtccatcaactagc atcaaagtgacgggaaaaacaaagaacaaaggaatacaggtcacatggcaagctgttacagccaatgataacgctggatc tcagtacgtacagaaagtcgttacggacggatacaacaacggagatgaattccctgtcggtataaccaaggtggagtata gggtgacagacggagaggggaacgtggctacaccaccatgctcattctctgtggaagtggaatccggaatagatttccag tgcagcaatccaccccagctacacaatggttacatgacttgtactgtgtctggtaaggtactaagttgtcagattgacca atgttacagtggctttgtaatgaaggagggaacgcccactcggtacacgtgtgacgctaacggggaatgggctccggtcg ctttcccagataggtttaccacagagacatgttttaaacctgcaccttccacctttgaacttgacttcagtttggttttt aattgtcctaacgctaacttcaccctgcgtgatgtccaggattgtttacagtcatcgggtttctgccctgaaggggacat cactctttgtgatcaccaacgtcttggaggaggaacgaaggataacatggttaatataacaggaaatgtcgttggacttc tagattcggcctttaaagaattaacacattttacgcggtctacaactttatttgtaatacaagcatcatatgatttcgtg atttcagccaagtgtgcaccaggatctcgatacatctccggggaatgtcagctgtgtgatccaggcacatatcaggaaga ggctggtcaggacacatgtactcaatgtccaaacggcgagaattctatattaggttccttcttcattggacaatgtaccc taagtgcagcacccttaactgataaggaaagctcttctatgaatatggtgccagtcatcggtgccgttgttggcgtagtc gtattactgatagtagttattatcatcattgtctttgtcaagagaagacagacggagaggaaggagacgtacagcggact ggataatcccaatcaccagccgtataccatacctaacaacgcttttgaaatggatgaagaatacgcctctctcagtgaac acaagatgtgtacggaggatgatattgctgaagctaagcggaagaaggaagacgatgacacgtattgtcaaccaagacga gctgaacccaacccgtatgagatggacctgcgcaaatctaaaatggatgaccatgattacggacaaattaaagacggaaa accagaaaaaatggaagcatgcggcggagatgacgactatttgcaaccttga |
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Protein
| Protein ID | pfu_aug1.0_1298.1_29661.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1298.1_29661.t1 MRSIDAVAQEMIYFSDAAMMAIYSCKIDGSELREILNSSNGIGQVEGLAIDFEQRRLYYTNTGYQEKGGVHFWHAIEMVD LEDTNKRRRVLTAVERPRALYIDSDSRKTIYRANFDGTNVEEFYTVNDHSVVSLALYGGSLYWTATISNAPNTVIEVNLP SDSNATTFDLNSLGLSNVMATSCSGQPLPIVLSMTKLYWRKDAQTIQLVASDKQGTTTANVRVKVKDVTPPTIENCPSTS IKVTGKTKNKGIQVTWQAVTANDNAGSQYVQKVVTDGYNNGDEFPVGITKVEYRVTDGEGNVATPPCSFSVEVESGIDFQ CSNPPQLHNGYMTCTVSGKVLSCQIDQCYSGFVMKEGTPTRYTCDANGEWAPVAFPDRFTTETCFKPAPSTFELDFSLVF NCPNANFTLRDVQDCLQSSGFCPEGDITLCDHQRLGGGTKDNMVNITGNVVGLLDSAFKELTHFTRSTTLFVIQASYDFV ISAKCAPGSRYISGECQLCDPGTYQEEAGQDTCTQCPNGENSILGSFFIGQCTLSAAPLTDKESSSMNMVPVIGAVVGVV VLLIVVIIIIVFVKRRQTERKETYSGLDNPNHQPYTIPNNAFEMDEEYASLSEHKMCTEDDIAEAKRKKEDDDTYCQPRR AEPNPYEMDLRKSKMDDHDYGQIKDGKPEKMEACGGDDDYLQP |
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