Gene
| Gene Model ID | pfu_aug1.0_12995.1_32278 |
|---|---|
| Locus | scaffold12995.1 : 9552 ... 11785 : - |
| To GenomeBrowser | scaffold12995.1:9552..11785 |
| Genes list of scaffold | scaffold12995.1 |
| Synonym | pfu_aug2.0_1866.1_21827 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | ferritin_like protein |
| Description | high homology to nr |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12995.1_32278.t1 | 1 | 1 | Ferritin | 17 | 156 | 0.0 | 163.9 | 0.0 | 0.0 | 163.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 2 |
| 8-16cell | 2 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 2 |
| maleGonad | 1 |
| mantle | 6 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_12995.1_32278.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12995.1_32278.t1 atggcactgagtcaacctcgccagaatttccacgttgaaagtgaagcagggatcaacaggcagataaacatggaattgta cgccagttacacctatcagtcaatgtccttctactttgatcgagatgatgtcgctctaccaggatttgccaaatttttca agcactcgtctgatgaggaacgagaacatgctgagaagctgatgaagtatcagaacaagagaggagggcgtatcgttctc caagacatcaagaagcctgatcgtgatgattgggggactggactggagtccatgcaggttgccctgcaactagagaagtc tgtcaatcagtccctgcttgaccttcataaagtggccgacacccatggagatgcccagatgatggatttcatagagagtg aataccttgaggagcaggtgaatgctataaaggagatctctgaccacatcacccagctgaagcgtgtaggtccaggactt ggagagtaccaatatgacttgaaactccagtcatccgagtaa |
|
Protein
| Protein ID | pfu_aug1.0_12995.1_32278.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12995.1_32278.t1 MALSQPRQNFHVESEAGINRQINMELYASYTYQSMSFYFDRDDVALPGFAKFFKHSSDEEREHAEKLMKYQNKRGGRIVL QDIKKPDRDDWGTGLESMQVALQLEKSVNQSLLDLHKVADTHGDAQMMDFIESEYLEEQVNAIKEISDHITQLKRVGPGL GEYQYDLKLQSSE |
|