Gene
Gene Model ID | pfu_aug1.0_12995.1_32278 |
---|---|
Locus | scaffold12995.1 : 9552 ... 11785 : - |
To GenomeBrowser | scaffold12995.1:9552..11785 |
Genes list of scaffold | scaffold12995.1 |
Synonym | pfu_aug2.0_1866.1_21827 |
Manual annotation
Study field | Biomineralization |
---|---|
Gene name | ferritin_like protein |
Description | high homology to nr |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_12995.1_32278.t1 | 1 | 1 | Ferritin | 17 | 156 | 0.0 | 163.9 | 0.0 | 0.0 | 163.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-4cell | 2 |
8-16cell | 2 |
egg-Dshape | 1 |
trochophore | 1 |
>Adult tissues | |
Dshape | 1 |
adductorMuscle | 2 |
maleGonad | 1 |
mantle | 6 |
mantleEdge | 1 |
mantlePallium | 1 |
pearlSac | 1 |
Transcript
Transcript ID | pfu_aug1.0_12995.1_32278.t1 |
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Definition | - |
>pfu_aug1.0_12995.1_32278.t1 atggcactgagtcaacctcgccagaatttccacgttgaaagtgaagcagggatcaacaggcagataaacatggaattgta cgccagttacacctatcagtcaatgtccttctactttgatcgagatgatgtcgctctaccaggatttgccaaatttttca agcactcgtctgatgaggaacgagaacatgctgagaagctgatgaagtatcagaacaagagaggagggcgtatcgttctc caagacatcaagaagcctgatcgtgatgattgggggactggactggagtccatgcaggttgccctgcaactagagaagtc tgtcaatcagtccctgcttgaccttcataaagtggccgacacccatggagatgcccagatgatggatttcatagagagtg aataccttgaggagcaggtgaatgctataaaggagatctctgaccacatcacccagctgaagcgtgtaggtccaggactt ggagagtaccaatatgacttgaaactccagtcatccgagtaa |
Protein
Protein ID | pfu_aug1.0_12995.1_32278.t1 |
---|---|
Definition | - |
>pfu_aug1.0_12995.1_32278.t1 MALSQPRQNFHVESEAGINRQINMELYASYTYQSMSFYFDRDDVALPGFAKFFKHSSDEEREHAEKLMKYQNKRGGRIVL QDIKKPDRDDWGTGLESMQVALQLEKSVNQSLLDLHKVADTHGDAQMMDFIESEYLEEQVNAIKEISDHITQLKRVGPGL GEYQYDLKLQSSE |