Gene
| Gene Model ID | pfu_aug1.0_13006.1_53892 |
|---|---|
| Locus | scaffold13006.1 : 28886 ... 31373 : + |
| To GenomeBrowser | scaffold13006.1:28886..31373 |
| Genes list of scaffold | scaffold13006.1 |
| Synonym | pfu_aug2.0_302.1_07328 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13006.1_53892.t1 | 3 | 1 | DUF4291 | 29 | 57 | 3.3e-12 | 46.3 | 0.23 | 3300.0 | -2.5 |
| pfu_aug1.0_13006.1_53892.t1 | 3 | 2 | DUF4291 | 88 | 120 | 3.3e-12 | 46.3 | 2.0e-10 | 2.9e-06 | 27.0 |
| pfu_aug1.0_13006.1_53892.t1 | 3 | 3 | DUF4291 | 124 | 166 | 3.3e-12 | 46.3 | 2.3e-08 | 0.00033 | 20.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_13006.1_53892.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13006.1_53892.t1 atgcgaaatgtgctgtttgcctataaaaaccgcgaatggtcgatttattttggtcattttctcctgaaatcgcatcgaca gagaccaaattttagtaaaaagaagtttatcatggctacttgttcagattcagatacgaacaccgagtatgaccagtctc atgagtctgattttacaaagccagatcatgccaaagcaactggtttggacatggagttatacgtaaaacaaagagacagt gaacactggccgaagagtggtcagcacattttagctcagtttactgatgaggatgtcgttgtgtaccaggctttcaaaca gtccatcgcttcttacgcagtagaaaatcagcatctttatctgtttcagacgttacagaagtttggcactactgacatcg ttagtattacagatattaccaagtttgtacgagagcagaaaaagattttggacaaaggaggacaatctcaactcataatc cctcgtgaacgagtttatcctgtcgcagacccaaacgttagagccagaataggattggatgaagtcagttga |
|
Protein
| Protein ID | pfu_aug1.0_13006.1_53892.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13006.1_53892.t1 MRNVLFAYKNREWSIYFGHFLLKSHRQRPNFSKKKFIMATCSDSDTNTEYDQSHESDFTKPDHAKATGLDMELYVKQRDS EHWPKSGQHILAQFTDEDVVVYQAFKQSIASYAVENQHLYLFQTLQKFGTTDIVSITDITKFVREQKKILDKGGQSQLII PRERVYPVADPNVRARIGLDEVS |
|