Gene
| Gene Model ID | pfu_aug1.0_13007.1_17939 |
|---|---|
| Locus | scaffold13007.1 : 1051 ... 5208 : + |
| To GenomeBrowser | scaffold13007.1:1051..5208 |
| Genes list of scaffold | scaffold13007.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13007.1_17939.t1 | 1 | 1 | Ribosomal_S4 | 8 | 106 | 3.5e-29 | 101.0 | 9.1e-33 | 6.8e-29 | 100.1 |
| pfu_aug1.0_13007.1_17939.t1 | 1 | 1 | S4 | 107 | 150 | 2.4e-13 | 49.3 | 1.0e-16 | 7.5e-13 | 47.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13007.1_17939.t1 | gi|160347070|gb|ABX26127.1| | ribosomal protein S9 [Haliotis discus discus] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_13007.1_17939.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13007.1_17939.t1 atgcctcgtgtgccactagtacgtagtaaaacctacacaaccccaagacgtccttttgaaaaggaacgtttggatcagga gttgaagctgattggtgaatttggtctcagaaataaacgtgaagtatggagagttaaatacactctaggaaaaattagga aggctgcaagagaattgctgactctagaagaaaaagatccaaaacgtctgtttgaaggcaatgccctcttgcgtagactt gtgcgcattggagtacttgatgaaagcaaaatgaagctcgattatgtattgggtttgagaacagaggatttcttggaacg tcgtctccagactcaagtattcaaattgggattggccaaaagtattcaccatgccagagtgttgatcagacaaagacaca ttcgtgtgaggaaacaggtagtgaacatcccatcttttgtggttcgtttggattcacaaaaacacattgacttctctctg aggtcaccattcggaggtggacgtccaggccgtgttaagaggaagaacgccaagaagggatcaggtggtggagatgaaga ggaagattaa |
|
Protein
| Protein ID | pfu_aug1.0_13007.1_17939.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13007.1_17939.t1 MPRVPLVRSKTYTTPRRPFEKERLDQELKLIGEFGLRNKREVWRVKYTLGKIRKAARELLTLEEKDPKRLFEGNALLRRL VRIGVLDESKMKLDYVLGLRTEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSL RSPFGGGRPGRVKRKNAKKGSGGGDEEED |
|