Gene
| Gene Model ID | pfu_aug1.0_13007.1_17941 |
|---|---|
| Locus | scaffold13007.1 : 8684 ... 13705 : - |
| To GenomeBrowser | scaffold13007.1:8684..13705 |
| Genes list of scaffold | scaffold13007.1 |
| Synonym | pfu_aug2.0_189.1_30371 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13007.1_17941.t1 | 1 | 1 | Ribosomal_S4 | 8 | 106 | 3.5e-29 | 101.0 | 9.1e-33 | 6.8e-29 | 100.1 |
| pfu_aug1.0_13007.1_17941.t1 | 1 | 1 | S4 | 107 | 150 | 2.4e-13 | 49.3 | 1.0e-16 | 7.5e-13 | 47.6 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 6 |
| egg-4cell | 3 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 4 |
| maleGonad | 2 |
| mantle | 2 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_13007.1_17941.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13007.1_17941.t1 atgcctcgtgtgccactagtacgtagtaaaacctacacaaccccaagacgtccttttgaaaaggaacgtttggatcagga gttgaagctgattggtgaatttggtctcagaaataaacgtgaagtatggagagttaaatacactctaggaaaaattagga aggctgcaagagaattgctgactctagaagaaaaagatccaaaacgtctgtttgaaggcaatgccctcttgcgtagactt gtgcgcattggagtacttgatgaaagcaaaatgaagctcgattatgtattgggtttgagaacagaggatttcttggaacg tcgtctccagactcaagtattcaaattgggattggccaaaagtattcaccatgccagagtgttgatcagacaaagacaca ttcgtgtgaggaaacaggtagtgaacatcccatcttttgtggttcgtttggattcacaaaaacacattgacttctctctg aggtcaccattcggaggtggacgtccaggccgtgttaagaggaagaacgccaagaagggatcaggtggtggagatgaaga ggaagattaa |
|
Protein
| Protein ID | pfu_aug1.0_13007.1_17941.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13007.1_17941.t1 MPRVPLVRSKTYTTPRRPFEKERLDQELKLIGEFGLRNKREVWRVKYTLGKIRKAARELLTLEEKDPKRLFEGNALLRRL VRIGVLDESKMKLDYVLGLRTEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSL RSPFGGGRPGRVKRKNAKKGSGGGDEEED |
|