Gene
| Gene Model ID | pfu_aug1.0_13008.1_68584 |
|---|---|
| Locus | scaffold13008.1 : 1 ... 40815 : + |
| To GenomeBrowser | scaffold13008.1:1..40815 |
| Genes list of scaffold | scaffold13008.1 |
| Synonym | pfu_aug2.0_1190.1_01459 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13008.1_68584.t1 | 1 | 1 | Rhomboid | 92 | 174 | 1.0e-12 | 48.2 | 1.1e-16 | 1.6e-12 | 47.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13008.1_68584.t1 | gi|260824301|ref|XP_002607106.1| | hypothetical protein BRAFLDRAFT_68100 [Branchiostoma floridae] | 3.0e-23 |
Transcript
| Transcript ID | pfu_aug1.0_13008.1_68584.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13008.1_68584.t1 gggaaaaagaagaagagacgtccagcatttggaagaagttttactccaggaagtgtaaaaaaagaacacaaaaccaagct accagattggatttgtgaggataccaacaaacctggtactctgcagtcggactgctctagttctgattgtcacatgacct gtgaccttctaggacgaccctgttgccacggtatccagggtgaatgtatgattactacaagagaacattgtgacttcaag aaaggttacttccatgatgacaaatttttatgttcacaggtcggaccgtcaggagcacagtttggggttttagcatgtat gtacgtggatatcctcaacgttattatcaacaggaaagtaaataacgaccatgccgacaacagcagactgtggaatgtct tcatcctgtacagcgttatactgctgattctcttcgttctcggacttttgccgtggcttgataactgggcccacattttc ggcttcatatcgggagtatttatctcgctagtggtaatgaaagatactattatactgatctgtaccttagccatatatgg ttttggagactttgggtttaaagaaattacaacacaagaagtggttttaaaacccaatttagctttagagctagatcaac gttcagagtttggcaacatgtggggcggccctgatcaaatatgtgaggataccagcaaaccagggcatctccaacctaac tgtgcaaacaatgattctgactgtcacatgacctgtgaccttctaggacgaccctgttgtcatggtatccagggtgaatg catgattactaccagagaacactgtgaatttagacagggattctttcacgaagataaattcttatgctcacaattaccta agtggattccgaatgcaggaactcgtctgctcctctatattcggctcatcatcacttttaattatacttaa |
|
Protein
| Protein ID | pfu_aug1.0_13008.1_68584.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13008.1_68584.t1 GKKKKRRPAFGRSFTPGSVKKEHKTKLPDWICEDTNKPGTLQSDCSSSDCHMTCDLLGRPCCHGIQGECMITTREHCDFK KGYFHDDKFLCSQVGPSGAQFGVLACMYVDILNVIINRKVNNDHADNSRLWNVFILYSVILLILFVLGLLPWLDNWAHIF GFISGVFISLVVMKDTIILICTLAIYGFGDFGFKEITTQEVVLKPNLALELDQRSEFGNMWGGPDQICEDTSKPGHLQPN CANNDSDCHMTCDLLGRPCCHGIQGECMITTREHCEFRQGFFHEDKFLCSQLPKWIPNAGTRLLLYIRLIITFNYT |
|