Gene
| Gene Model ID | pfu_aug1.0_1302.1_22526 |
|---|---|
| Locus | scaffold1302.1 : 20546 ... 24935 : + |
| To GenomeBrowser | scaffold1302.1:20546..24935 |
| Genes list of scaffold | scaffold1302.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1302.1_22526.t1 | 2 | 1 | bZIP_Maf | 2 | 91 | 3.4e-19 | 68.9 | 6.9e-23 | 3.4e-19 | 68.9 |
| pfu_aug1.0_1302.1_22526.t1 | 1 | 1 | bZIP_1 | 30 | 87 | 1.0e-08 | 34.9 | 3.7e-12 | 1.8e-08 | 34.1 |
| pfu_aug1.0_1302.1_22526.t1 | 2 | 1 | bZIP_2 | 33 | 73 | 5.1e-06 | 26.2 | 1.0e-09 | 5.1e-06 | 26.2 |
| pfu_aug1.0_1302.1_22526.t1 | 2 | 2 | bZIP_2 | 82 | 94 | 5.1e-06 | 26.2 | 0.75 | 3700.0 | -2.2 |
| pfu_aug1.0_1302.1_22526.t1 | 2 | 2 | bZIP_Maf | 123 | 146 | 3.4e-19 | 68.9 | 0.097 | 480.0 | 1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1302.1_22526.t1 | gi|260835401|ref|XP_002612697.1| | hypothetical protein BRAFLDRAFT_127500 [Branchiostoma floridae] | 1.99965e-42 |
Transcript
| Transcript ID | pfu_aug1.0_1302.1_22526.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1302.1_22526.t1 atggatcaaattgtagagtctccagtggaggaattcaatgaaattcttacaaggcacaagcttacagaaccgcaactaca attgataagagacattaggcggagagggaaaaacaaggtggcagcacaaaattgtcggaaaagaaaattagacgttattt tgaacttagaggatgaaatgaccatgctcaaagaccagaaagacaaattgttagcagaaaggcatatgatagacaagcag acaagagacatgaaagagaagttcagtattctttaccgtgaaattttccagtctttacgtgatgagcatggccgtccgta cgatccacaccatttctccttgcagcagtccagtgatggtaatgtatttttagttcccagaaatctaacggcagacgagc agcaagccaaaatcaacaaaaagcgaaaagacgagaaaaaggaggattga |
|
Protein
| Protein ID | pfu_aug1.0_1302.1_22526.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1302.1_22526.t1 MDQIVESPVEEFNEILTRHKLTEPQLQLIRDIRRRGKNKVAAQNCRKRKLDVILNLEDEMTMLKDQKDKLLAERHMIDKQ TRDMKEKFSILYREIFQSLRDEHGRPYDPHHFSLQQSSDGNVFLVPRNLTADEQQAKINKKRKDEKKED |
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