Gene
| Gene Model ID | pfu_aug1.0_13020.1_03302 |
|---|---|
| Locus | scaffold13020.1 : 41636 ... 50188 : + |
| To GenomeBrowser | scaffold13020.1:41636..50188 |
| Genes list of scaffold | scaffold13020.1 |
| Synonym | pfu_aug2.0_402.1_07456 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13020.1_03302.t1 | 1 | 1 | Utp14 | 17 | 689 | 0.0 | 512.4 | 0.0 | 0.0 | 512.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13020.1_03302.t1 | gi|36956697|gb|AAQ87009.1| | juvenile spermatogonial depletion [Mus musculus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| trochophore | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 2 |
Transcript
| Transcript ID | pfu_aug1.0_13020.1_03302.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13020.1_03302.t1 atgtctgatcaggaggacctaggaggggctatcagtgccagtgaagatgagttggtaggatcattgaaggagacagccag ccatggggagttaaagaagcagttacgatctgtacagaaaaacaagagagtctcggtccctctccctacacaggaaaaac agaagattgaaagagcggtagcttatgagaagacatcgaaggatgtgtccaagtgggatccaatagtgaaagaaaatagg aaggctgagcaaataatatatccgttggaaagatcaacaatatccgtgcatacaacagacagctttgttaaacgcttcca gccccgcacaccattagaaatggaagttgcagcagtccttgcaggaagccagaatgtaccacagaaaaataaagaactga ccccggcagaggagaaagccatcaaagccatgagtttggaggaggctaaagaaaggagagcagagcttatgaagtacaga gcattactgtcttacaaagaggccaaggccaggtggcaggggaaaatcaaaagtaaaaaatatcaccgtatattgaaaaa ggaaaaattgaagaaagaaaagcgtgccctagaggagttagaaaagaatgatcccgagggttaccaacaaaagatggagg gtgttgaaaaacagagaatacaggaaagaatgagtctgaagcatagaggtggtagtaagtttgctcgtaaacagatgatg tattccaagtatgatgagcaggctcggcagcaggtacaggacatgctccagaagagccgagagctcacagagaagcagcg ggtagtaagtgacagtgatgatgatgaggaagacggagttgccatggatcctgaagatgaagaagtaatggatgccatgg gagataanaacccctggatggagacagggtcaggaaaaaatagccagtacagtcgtcctcaagcgcaagtcagtacagaa gatcaaaaggaggggtccgacaatgataaagagggagaaggtggggtggaagatacaagagtgaccaatttacggaatgg cgaagattcagccaatcagaaactggtattaggaaattcgaaaacagtgaaagctgatgaagattcagaagaggaggtta caattgaagaaatatttaaatctctggatgaggaaaaattgaaaagaacattttcagaagaaaaggattctcaggcagag ggtgaaaggcgtaagaggaggaggagaagaaagaaaaagacaaaagttaatcaggaggtgaaagatgaaagtgatgttgt ttctaggaaaaggaaacttgaaacgaaggacaatgaaataaaagatgatgaagaagatgaagaagaggaggatttaattg atgaaggtttaactagggtgaagactctggaagatattgaaagtaaaagacagagtgatgacgcagaaaccactatcgtg aagaagaaaaggaaaaataagaaaaaaggcgagaaagattcacaaaatgttggaaaggacgatgtgcccgataaagtgga ggaagtttatgttgatcctaaaaaactatttactgtagaaacaaaaatgaaatctgccattcccgacatgacgggacatg atgacgatgacgatgattatgacgatgatgatcagcagaggatgacaatagctcaggcgtttgaggatgacgatgtgata gaggaattcaaagaagagaaaaagatgataatggacagggacaaacctaaggacattgacctgaccttgccagggtgggg cagctggggagggacagggattaaacctaagaagaaaaacaaaaggttcattataaaggcaccaccagcacttccacgga aagataaaagcttaggaaatgtcatcatcagtgagttaaaagacaaggcaatcagcaagtatcaagtgagtgacctgcct tttccatatggtgatgtaaagcagtttgaacagagtatacgagcccctgttggaaaaacttggaatcccgaaacagcttt caaacaacttatcaagccgaaagttgtgacaaagctcggccaagtgattaaccctattgacaaagatgaggtgttcaaaa aacagaaagtcacaaatcaactcccagaaaatgcccagaaagaacagagtaaaggacatggaaagaaacggaggaaacgt tga |
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Protein
| Protein ID | pfu_aug1.0_13020.1_03302.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13020.1_03302.t1 MSDQEDLGGAISASEDELVGSLKETASHGELKKQLRSVQKNKRVSVPLPTQEKQKIERAVAYEKTSKDVSKWDPIVKENR KAEQIIYPLERSTISVHTTDSFVKRFQPRTPLEMEVAAVLAGSQNVPQKNKELTPAEEKAIKAMSLEEAKERRAELMKYR ALLSYKEAKARWQGKIKSKKYHRILKKEKLKKEKRALEELEKNDPEGYQQKMEGVEKQRIQERMSLKHRGGSKFARKQMM YSKYDEQARQQVQDMLQKSRELTEKQRVVSDSDDDEEDGVAMDPEDEEVMDAMGDXNPWMETGSGKNSQYSRPQAQVSTE DQKEGSDNDKEGEGGVEDTRVTNLRNGEDSANQKLVLGNSKTVKADEDSEEEVTIEEIFKSLDEEKLKRTFSEEKDSQAE GERRKRRRRRKKKTKVNQEVKDESDVVSRKRKLETKDNEIKDDEEDEEEEDLIDEGLTRVKTLEDIESKRQSDDAETTIV KKKRKNKKKGEKDSQNVGKDDVPDKVEEVYVDPKKLFTVETKMKSAIPDMTGHDDDDDDYDDDDQQRMTIAQAFEDDDVI EEFKEEKKMIMDRDKPKDIDLTLPGWGSWGGTGIKPKKKNKRFIIKAPPALPRKDKSLGNVIISELKDKAISKYQVSDLP FPYGDVKQFEQSIRAPVGKTWNPETAFKQLIKPKVVTKLGQVINPIDKDEVFKKQKVTNQLPENAQKEQSKGHGKKRRKR |
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