Gene
| Gene Model ID | pfu_aug1.0_13028.1_61139 |
|---|---|
| Locus | scaffold13028.1 : 5565 ... 13735 : - |
| To GenomeBrowser | scaffold13028.1:5565..13735 |
| Genes list of scaffold | scaffold13028.1 |
| Synonym | pfu_aug2.0_1509.1_31725 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13028.1_61139.t1 | 3 | 1 | I-set | 3 | 36 | 7.6e-14 | 51.3 | 8.5e-07 | 0.0025 | 17.6 |
| pfu_aug1.0_13028.1_61139.t1 | 3 | 1 | V-set | 9 | 46 | 3.1e-08 | 33.5 | 8.7e-07 | 0.0026 | 17.6 |
| pfu_aug1.0_13028.1_61139.t1 | 3 | 1 | Ig_2 | 14 | 37 | 8.0e-09 | 35.5 | 0.0014 | 4.2 | 7.5 |
| pfu_aug1.0_13028.1_61139.t1 | 3 | 1 | Ig_3 | 19 | 36 | 1.8e-07 | 31.5 | 0.013 | 37.0 | 4.9 |
| pfu_aug1.0_13028.1_61139.t1 | 3 | 2 | Ig_3 | 55 | 77 | 1.8e-07 | 31.5 | 0.073 | 220.0 | 2.4 |
| pfu_aug1.0_13028.1_61139.t1 | 3 | 2 | I-set | 57 | 91 | 7.6e-14 | 51.3 | 3.2e-05 | 0.095 | 12.5 |
| pfu_aug1.0_13028.1_61139.t1 | 3 | 2 | V-set | 57 | 78 | 3.1e-08 | 33.5 | 0.06 | 180.0 | 2.0 |
| pfu_aug1.0_13028.1_61139.t1 | 3 | 2 | Ig_2 | 60 | 93 | 8.0e-09 | 35.5 | 0.0016 | 4.8 | 7.3 |
| pfu_aug1.0_13028.1_61139.t1 | 3 | 3 | I-set | 112 | 206 | 7.6e-14 | 51.3 | 1.1e-06 | 0.0032 | 17.2 |
| pfu_aug1.0_13028.1_61139.t1 | 3 | 3 | Ig_3 | 113 | 197 | 1.8e-07 | 31.5 | 2.0e-07 | 0.00058 | 20.3 |
| pfu_aug1.0_13028.1_61139.t1 | 3 | 3 | V-set | 115 | 198 | 3.1e-08 | 33.5 | 6.4e-05 | 0.19 | 11.6 |
| pfu_aug1.0_13028.1_61139.t1 | 3 | 3 | Ig_2 | 119 | 201 | 8.0e-09 | 35.5 | 1.1e-06 | 0.0034 | 17.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_13028.1_61139.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13028.1_61139.t1 atgaacagcaagaaacgagtatacattaacaatgtgtacagaaaccaatgggacctagtcatagaaaacatcaaactgtc ggatgaggggaaatatgaatgcaagtcaaggactacggattttgcacaatatcaactctttataagagagataggaatag aaggacctaaactagaaatcaggaacataaccaggcattgtatggcttcctacaggtgccatgctcgtaatagatacctg gaactcgtcactgtcaacgcttccttcgaagttcaagtagtcttcaagccatcagcagttcttagtaccagcgttaatgg ggttggaacggatatctcaagaatacgtggtcaaattggtgacgaagttcgtatagtctgtgacgtttcatatttcccgc caggatccatcatgttgtaccacgtgaaaagtctcctagcaaccgttgaaaacgatcaagtgaggaaagaaaatattgca aatccctatgaatttaacagtcgttcaattcataattctagaaaacaattcataatgacatttcaacttgaaagtcaatc tactggacgttacacatgcgtggcaaacaatccccatggcaacgcaaagatatctatctggatcgaattatga |
|
Protein
| Protein ID | pfu_aug1.0_13028.1_61139.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13028.1_61139.t1 MNSKKRVYINNVYRNQWDLVIENIKLSDEGKYECKSRTTDFAQYQLFIREIGIEGPKLEIRNITRHCMASYRCHARNRYL ELVTVNASFEVQVVFKPSAVLSTSVNGVGTDISRIRGQIGDEVRIVCDVSYFPPGSIMLYHVKSLLATVENDQVRKENIA NPYEFNSRSIHNSRKQFIMTFQLESQSTGRYTCVANNPHGNAKISIWIEL |
|