Gene
| Gene Model ID | pfu_aug1.0_13039.1_61142 |
|---|---|
| Locus | scaffold13039.1 : 14239 ... 21685 : - |
| To GenomeBrowser | scaffold13039.1:14239..21685 |
| Genes list of scaffold | scaffold13039.1 |
| Synonym | pfu_aug2.0_4331.1_05980 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13039.1_61142.t1 | 4 | 1 | Ank | 2 | 23 | 6.5e-20 | 69.8 | 0.00037 | 0.91 | 9.4 |
| pfu_aug1.0_13039.1_61142.t1 | 2 | 1 | Ank_2 | 3 | 88 | 2.1e-23 | 82.4 | 3.9e-20 | 9.7e-17 | 61.1 |
| pfu_aug1.0_13039.1_61142.t1 | 3 | 1 | Ank_4 | 3 | 46 | 1.6e-12 | 47.5 | 3.0e-09 | 7.5e-06 | 26.3 |
| pfu_aug1.0_13039.1_61142.t1 | 4 | 1 | Ank_3 | 3 | 21 | 5.3e-12 | 44.7 | 0.0017 | 4.2 | 7.9 |
| pfu_aug1.0_13039.1_61142.t1 | 4 | 1 | Ank_5 | 4 | 34 | 6.8e-11 | 42.0 | 6.0e-05 | 0.15 | 12.3 |
| pfu_aug1.0_13039.1_61142.t1 | 4 | 2 | Ank_5 | 12 | 64 | 6.8e-11 | 42.0 | 3.6e-08 | 8.9e-05 | 22.6 |
| pfu_aug1.0_13039.1_61142.t1 | 4 | 2 | Ank_3 | 27 | 54 | 5.3e-12 | 44.7 | 0.00011 | 0.27 | 11.5 |
| pfu_aug1.0_13039.1_61142.t1 | 4 | 2 | Ank | 28 | 57 | 6.5e-20 | 69.8 | 7.0e-09 | 1.7e-05 | 24.3 |
| pfu_aug1.0_13039.1_61142.t1 | 3 | 2 | Ank_4 | 46 | 80 | 1.6e-12 | 47.5 | 0.0023 | 5.6 | 7.6 |
| pfu_aug1.0_13039.1_61142.t1 | 4 | 3 | Ank_5 | 46 | 89 | 6.8e-11 | 42.0 | 3.5e-07 | 0.00088 | 19.4 |
| pfu_aug1.0_13039.1_61142.t1 | 2 | 2 | Ank_2 | 62 | 122 | 2.1e-23 | 82.4 | 4.7e-11 | 1.2e-07 | 31.9 |
| pfu_aug1.0_13039.1_61142.t1 | 4 | 3 | Ank | 62 | 88 | 6.5e-20 | 69.8 | 5.5e-08 | 0.00014 | 21.5 |
| pfu_aug1.0_13039.1_61142.t1 | 3 | 3 | Ank_4 | 62 | 116 | 1.6e-12 | 47.5 | 6.0e-08 | 0.00015 | 22.1 |
| pfu_aug1.0_13039.1_61142.t1 | 4 | 3 | Ank_3 | 62 | 87 | 5.3e-12 | 44.7 | 3.0e-05 | 0.075 | 13.3 |
| pfu_aug1.0_13039.1_61142.t1 | 4 | 4 | Ank_5 | 91 | 116 | 6.8e-11 | 42.0 | 0.00028 | 0.69 | 10.2 |
| pfu_aug1.0_13039.1_61142.t1 | 4 | 4 | Ank | 98 | 120 | 6.5e-20 | 69.8 | 4.1e-06 | 0.01 | 15.6 |
| pfu_aug1.0_13039.1_61142.t1 | 4 | 4 | Ank_3 | 98 | 121 | 5.3e-12 | 44.7 | 0.00018 | 0.44 | 10.9 |
| pfu_aug1.0_13039.1_61142.t1 | 1 | 1 | SOCS_box | 153 | 186 | 4.8e-07 | 29.5 | 4.0e-10 | 9.9e-07 | 28.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_13039.1_61142.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13039.1_61142.t1 atgttttcaaataacgtagaagtgcttaatattcttattaatgccggcagtgatttggaccacacgtcgaacaaacgaag acaaacggcattacacgctgccgtcattgctgacaaacgaggattcgttgaatgcttgcttaacgcaggagcaaatccgg atcagcaagatttcttatataagacgccccttctccatgcagtccacaagaatctgtctcagtgtgttagtttactaata cagcacaactgtaacgtgaacagaactggctgggtgaacggaattagtacaactccacttctacttgccctagttcaaaa taacttagaaatcaccaagatgctgttacttgctggtgcaaagtttcagaaaattgcgatataccagacatataacataa gacaatactacgcgactgtggagaataacttgaatatggaagtgcgacccatctacctccagcaacagtgcagggtttgt atcagacatctgttaaagccaagatttctggaaaaactaaaagaaatgttactgcctaaaaagcttaaggaatatttaga gattgttgagttatttggttatgatagatga |
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Protein
| Protein ID | pfu_aug1.0_13039.1_61142.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13039.1_61142.t1 MFSNNVEVLNILINAGSDLDHTSNKRRQTALHAAVIADKRGFVECLLNAGANPDQQDFLYKTPLLHAVHKNLSQCVSLLI QHNCNVNRTGWVNGISTTPLLLALVQNNLEITKMLLLAGAKFQKIAIYQTYNIRQYYATVENNLNMEVRPIYLQQQCRVC IRHLLKPRFLEKLKEMLLPKKLKEYLEIVELFGYDR |
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