Gene
| Gene Model ID | pfu_aug1.0_1306.1_22529 |
|---|---|
| Locus | scaffold1306.1 : 1 ... 17035 : - |
| To GenomeBrowser | scaffold1306.1:1..17035 |
| Genes list of scaffold | scaffold1306.1 |
| Synonym | pfu_aug2.0_108.1_26853 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1306.1_22529.t1 | 5 | 1 | CUB | 30 | 69 | 0.0 | 444.3 | 4.9e-06 | 0.01 | 15.8 |
| pfu_aug1.0_1306.1_22529.t1 | 5 | 2 | CUB | 74 | 183 | 0.0 | 444.3 | 3.6e-37 | 7.7e-34 | 116.0 |
| pfu_aug1.0_1306.1_22529.t1 | 5 | 1 | CUB_2 | 91 | 118 | 6.1e-07 | 29.0 | 5.6e-05 | 0.12 | 11.9 |
| pfu_aug1.0_1306.1_22529.t1 | 1 | 1 | EGF_CA | 187 | 225 | 5.7e-09 | 35.8 | 7.7e-12 | 1.6e-08 | 34.3 |
| pfu_aug1.0_1306.1_22529.t1 | 1 | 1 | FXa_inhibition | 190 | 225 | 1.2e-09 | 38.0 | 2.2e-12 | 4.6e-09 | 36.2 |
| pfu_aug1.0_1306.1_22529.t1 | 5 | 3 | CUB | 229 | 339 | 0.0 | 444.3 | 1.9e-37 | 4.0e-34 | 116.9 |
| pfu_aug1.0_1306.1_22529.t1 | 5 | 2 | CUB_2 | 245 | 273 | 6.1e-07 | 29.0 | 0.00022 | 0.47 | 10.0 |
| pfu_aug1.0_1306.1_22529.t1 | 5 | 3 | CUB_2 | 328 | 353 | 6.1e-07 | 29.0 | 0.92 | 2000.0 | -1.7 |
| pfu_aug1.0_1306.1_22529.t1 | 5 | 4 | CUB | 346 | 454 | 0.0 | 444.3 | 2.4e-34 | 5.2e-31 | 106.9 |
| pfu_aug1.0_1306.1_22529.t1 | 5 | 4 | CUB_2 | 363 | 376 | 6.1e-07 | 29.0 | 0.37 | 780.0 | -0.4 |
| pfu_aug1.0_1306.1_22529.t1 | 5 | 5 | CUB | 459 | 572 | 0.0 | 444.3 | 3.5e-30 | 7.4e-27 | 93.6 |
| pfu_aug1.0_1306.1_22529.t1 | 5 | 5 | CUB_2 | 480 | 572 | 6.1e-07 | 29.0 | 0.00044 | 0.94 | 9.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1306.1_22529.t1 | gi|150378658|gb|ABR68098.1| | tolloid-like protein [Crassostrea ariakensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1306.1_22529.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1306.1_22529.t1 atgatcggatatgatggtaaagaatgtatgaagtggtattactgccagcagtatgacgtgcagaatttgatattggacat gattttaaaatccatttcaggtaggtattgcggaaatacggttccagacataatcatttctaacagcagtcgtttgtggc ttgaataccggacaattgacggatggggtactggatttgtagctgaattcaaagctatttgtgatcgtgtgattgaagca gagaaaggtcagctttctagccctaactacccggatcagtaccagccgaacaagcgctgtgaatggacaattattgtgaa tgacggctacaaagtggctgtacatctggataatatagagatagagagtcatgacttttgtaactatgactaccttgagg cccgagatggttggaattcatccgctcctgtcattggtcgatactgtggcttcactagtcctaagacgatccaatcaacg tccaatcagataaatcttgtcttcatttctgatgctacagttcaaagaaaggggttctccttacatttcactcaagaaat ggacgagtgtaacacaaatacccatggatgtgaacagaaatgtatcaacacagtaggaagctatagatgtgagtgtggtg tagggtacgaacttaattctgacggcaaaacgtgtgatgatacctgtggagagattctcgacacacctactggcacgttt tccaccccggggtatccaggacgctaccctcccgagaagacctgtatctggcagatagcagcgcccaaacagtatcgcat atcactcaactttacgcacttcgacatagagggaactaatcaagactgtgagtacgactcagtgcagattacaagtggag agaaaatgaacaagacaaaccatggtaaattctgtggtcagcagccgccatctgtaatcactgctgaatggaacataatg accgtcaaattctcgtccgacaactctgtacagcaaacaggatttcaagcttactacttcacagatgcaaatggatgtcg tcatctcataacagattccgatggagaaataagttcacagaactggcccaagttttaccccagtaattcagactgtactt ggctgtttgtcacaacccctggtcacaggaagaagatagtgttccaggaattatctgtggaaagacaggaacaatgcacg tacgatttcgttgccatctttgatgggaatgacactgatgatgatgtcttgggtcgtttttgtggtttcaaccttccaga tcctgtcatttcttccagaaacaaactcttgatgcaattcaaatcagacgagtccgtacaaagaaagggcttccatgcca ggcatagttcaatttgtggtggcacattcgtcgctgaaacaaacgcacagaggttgtattcccatgtaaagtttggagac cttaattacccaaacgatgctaggtgtaaatggattatcatgagtgaaacaggcactaacgtaaaattaaagtttgaaac gtttgacctggaaggagatccaagttgtggatatgacagtgttaagatatatgatggaaccactgattcgaagaatttgt tggaaaatttttgtggttcagaggtgccacctctagtaacatcaaaggggaacaccatgatagtggtatttacatctgac ggtaacgtcaactggaagggattctctgcagtatattatgaggacagtggacagtga |
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Protein
| Protein ID | pfu_aug1.0_1306.1_22529.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1306.1_22529.t1 MIGYDGKECMKWYYCQQYDVQNLILDMILKSISGRYCGNTVPDIIISNSSRLWLEYRTIDGWGTGFVAEFKAICDRVIEA EKGQLSSPNYPDQYQPNKRCEWTIIVNDGYKVAVHLDNIEIESHDFCNYDYLEARDGWNSSAPVIGRYCGFTSPKTIQST SNQINLVFISDATVQRKGFSLHFTQEMDECNTNTHGCEQKCINTVGSYRCECGVGYELNSDGKTCDDTCGEILDTPTGTF STPGYPGRYPPEKTCIWQIAAPKQYRISLNFTHFDIEGTNQDCEYDSVQITSGEKMNKTNHGKFCGQQPPSVITAEWNIM TVKFSSDNSVQQTGFQAYYFTDANGCRHLITDSDGEISSQNWPKFYPSNSDCTWLFVTTPGHRKKIVFQELSVERQEQCT YDFVAIFDGNDTDDDVLGRFCGFNLPDPVISSRNKLLMQFKSDESVQRKGFHARHSSICGGTFVAETNAQRLYSHVKFGD LNYPNDARCKWIIMSETGTNVKLKFETFDLEGDPSCGYDSVKIYDGTTDSKNLLENFCGSEVPPLVTSKGNTMIVVFTSD GNVNWKGFSAVYYEDSGQ |
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