Gene
| Gene Model ID | pfu_aug1.0_13062.1_10549 |
|---|---|
| Locus | scaffold13062.1 : 496 ... 5810 : + |
| To GenomeBrowser | scaffold13062.1:496..5810 |
| Genes list of scaffold | scaffold13062.1 |
| Synonym | pfu_aug2.0_275.1_17222 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13062.1_10549.t1 | 1 | 1 | Plant_tran | 160 | 329 | 4.3e-14 | 52.3 | 1.1e-16 | 4.0e-13 | 49.2 |
| pfu_aug1.0_13062.1_10549.t1 | 1 | 1 | DDE_Tnp_4 | 171 | 321 | 9.7e-37 | 126.0 | 3.9e-40 | 1.4e-36 | 125.4 |
| pfu_aug1.0_13062.1_10549.t1 | 1 | 1 | DDE_Tnp_1 | 265 | 321 | 7.2e-09 | 35.5 | 1.2e-09 | 4.3e-06 | 26.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13062.1_10549.t1 | gi|270004721|gb|EFA01169.1| | hypothetical protein TcasGA2_TC010492 [Tribolium castaneum] | 1.0e-39 |
Transcript
| Transcript ID | pfu_aug1.0_13062.1_10549.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13062.1_10549.t1 atgggtgtcattgcgctgataaaagaaatatatacatagcttgaagtcaaagaaacgacagagacaaataattcagcatc ctatttggacataatgttgtcccacgacactgatggtcacatgaacacctcactctatgacaaacgtgacgacattaatt tcagcattacaaactttccttttctaagacgcaacatcccttcatcgccagcttatggcgtgttcatatctcagttgata cgctatgccagagcaagtatcaaatatacggattttgttctgagagctaggcgtctttcagataagcttctcagtcaggg atatgtttgtgaccgacttacatcgtcacggaggaagttctacggtcgatattgggaactcgtcatacactatgatgtcc cactctccaggggcgcattcgatttgaactgttccggaagcagtagactgctgggaatggttcttagaggttttgaggca atacagggatttcctggagtaattggagctgttgatggaacacatatagctattacaccacctggtccaaatgaagctga ttacgtcaacaggaaaagttaccattctataattttacaggcagtatgtaagcatgatagaagttttacagacataaact gtggctggccaggacgagtcaatgatgctcgtgttttcagaacctcgaatgtttgcaagttccaatcacaactatgcgga caaaatcacctcattggggatggagcttatcatttatctcgcttcctaatgaagccttatcgtgaaagtccaaaccttac acaagcagaacaactatttaacaaaaaactctatagcactaggtccgttatagaacatgcctttggtatactgaaaacaa gatttcggcgactccaacatattaacatgaacaaaatagaacatatcgtgaagaccattgtgacctgttgtgtattgcat aacatttgcatcataaaccatgatgatcttgatgaacactttgaagccgaggtggatgacaatattggaattgaattatc tgcagacactgcggagggaaacctgaagcgccttttcttaactcgacaactgtga |
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Protein
| Protein ID | pfu_aug1.0_13062.1_10549.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13062.1_10549.t1 MGVIALIKEIYTXLEVKETTETNNSASYLDIMLSHDTDGHMNTSLYDKRDDINFSITNFPFLRRNIPSSPAYGVFISQLI RYARASIKYTDFVLRARRLSDKLLSQGYVCDRLTSSRRKFYGRYWELVIHYDVPLSRGAFDLNCSGSSRLLGMVLRGFEA IQGFPGVIGAVDGTHIAITPPGPNEADYVNRKSYHSIILQAVCKHDRSFTDINCGWPGRVNDARVFRTSNVCKFQSQLCG QNHLIGDGAYHLSRFLMKPYRESPNLTQAEQLFNKKLYSTRSVIEHAFGILKTRFRRLQHINMNKIEHIVKTIVTCCVLH NICIINHDDLDEHFEAEVDDNIGIELSADTAEGNLKRLFLTRQL |
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