Gene
| Gene Model ID | pfu_aug1.0_13066.1_61147 |
|---|---|
| Locus | scaffold13066.1 : 5490 ... 28868 : - |
| To GenomeBrowser | scaffold13066.1:5490..28868 |
| Genes list of scaffold | scaffold13066.1 |
| Synonym | pfu_aug2.0_5456.1_22677 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13066.1_61147.t1 | 1 | 1 | p450 | 41 | 456 | 0.0 | 242.1 | 0.0 | 0.0 | 241.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13066.1_61147.t1 | gi|260794076|ref|XP_002592036.1| | hypothetical protein BRAFLDRAFT_79625 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_13066.1_61147.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13066.1_61147.t1 gcttatcactgacctactatggaaatataggggccgctgagtcagggtctagatcagggtcctgtcatggttcaagcaag ccaagcagtatacctggaccagatcctagtacagaacaagatggaaatcttccggacatatccagagcaggaagtcttca tgaatatctacttgacctacataaaacctacggagatatagcgtctttctggatgggtcgacagtttgttgtcagcatct gttcaccggagctcttcaaggaacatcagaacgtgtttgacagaccaccggaattgttcaaactgtttgaaccattcatt ggtccaaagtccatacagtacgcaaataaaggtgatggcagaaagcgaagaaataattacgacaaaatgcttgctcatga aaaattgaaggagtattaccatatttttcaaaatgttgcagacgatcttgagaagaaatggggacagcttgttaaagaag agcacatccctcttggacagtatatgagtgcctatgccatcaaagtcgttcttaacactttattcggggaatattttaca acagacaaagaaattcttacatttagaaggaattatgacatatgctggagtgaaatggagagaagactgacagatcaacc tgatcctgatagcccaagagtaaaggcgtttgaagatgccaaaaaaatagttacatcattgataaaaaaggccattgaac acagaaaaaaagttccaccgaattcagattctgagctatttatagactcactaatagacaacgctagtgatgaagaagag ttactgagtgatgctataagttatgctgtgggaggttttcacaccacaggaaatgttctgacgtgggggttctacttttt ggcgacacatgaagattttcaagagaaagctgtgaaagaaataaaacaggtgctgggaaatgagaatgtggatgcatcca acatgagtaaacttaagtatcttcatcaaattctggatgagacgatgaggtgtgcagtggttgctccaatggccgcaagg tttcaagattttgattctgagcttggtgggcataaaatacccaaaaatactccagttattcatgccctcggtgttagcct gcagaatgaaaaatatttcccactgccaaataaatttgatccagacagatttaacactgaaaacagcaaagccagaccat ctatggctttccaacctttcggatttgccggaaaaagggtgtgtccaggatatagatttgcatatgctgaagctattgtt tgccttgtgacattacttaggaagttcaaggtcaaaatggttgaaggtcaagttgtaacaccagtccatggactcgtcac acatccggaagaggagatctgggtcaaaatccaaaaaaggtga |
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Protein
| Protein ID | pfu_aug1.0_13066.1_61147.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13066.1_61147.t1 LSLTYYGNIGAAESGSRSGSCHGSSKPSSIPGPDPSTEQDGNLPDISRAGSLHEYLLDLHKTYGDIASFWMGRQFVVSIC SPELFKEHQNVFDRPPELFKLFEPFIGPKSIQYANKGDGRKRRNNYDKMLAHEKLKEYYHIFQNVADDLEKKWGQLVKEE HIPLGQYMSAYAIKVVLNTLFGEYFTTDKEILTFRRNYDICWSEMERRLTDQPDPDSPRVKAFEDAKKIVTSLIKKAIEH RKKVPPNSDSELFIDSLIDNASDEEELLSDAISYAVGGFHTTGNVLTWGFYFLATHEDFQEKAVKEIKQVLGNENVDASN MSKLKYLHQILDETMRCAVVAPMAARFQDFDSELGGHKIPKNTPVIHALGVSLQNEKYFPLPNKFDPDRFNTENSKARPS MAFQPFGFAGKRVCPGYRFAYAEAIVCLVTLLRKFKVKMVEGQVVTPVHGLVTHPEEEIWVKIQKR |
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