Gene
| Gene Model ID | pfu_aug1.0_13074.1_39435 |
|---|---|
| Locus | scaffold13074.1 : 1 ... 17705 : - |
| To GenomeBrowser | scaffold13074.1:1..17705 |
| Genes list of scaffold | scaffold13074.1 |
| Synonym | pfu_aug2.0_515.1_17516 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13074.1_39435.t1 | 2 | 1 | RNase_T | 29 | 126 | 4.7e-13 | 49.7 | 2.2e-16 | 1.6e-12 | 47.9 |
| pfu_aug1.0_13074.1_39435.t1 | 2 | 2 | RNase_T | 176 | 206 | 4.7e-13 | 49.7 | 0.27 | 2000.0 | -1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13074.1_39435.t1 | gi|242021728|ref|XP_002431295.1| | exonuclease nef-sp, putative [Pediculus humanus corporis] | 8.0e-38 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_13074.1_39435.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13074.1_39435.t1 atgggcatttccaaagattcatacaagaacttcaaatacaccaataagaaatactctactgtcaccagccaaagccccat gtttggacttgactgtgaaatgtgtatgactactgcaaaacgaccagaactaacttgggtgtcagtgataaatgaaaacc tggaaactgtctataatacattagtgaagccatacaacaaggtcaccaactatttgacaaggtggagtgggataaccaaa gccttgttggatccggtgaacaaacgtttagaagaggtacagagagacttacagaagttgctacccccagacgccatact gtgtggacaatccttacagtgtgatctcctagctctacaggtcaatcacactttgatgacttttgtatgtgaaatcttta acaagccattacgtccagattccttttcaactgctttagtagcggacaaagaagtagtcgattattttgggaggaatgac atagcttccatggaatcagactctgataagacaacaaaatcgctaacaaaatcctacgtacagtatcatgactttgtcta cagttccttcccatcattcaaacagtgcaatacaaaagaaatgaccgaagaaaacaagaagaaacttctttggaagatga gcaggaaggttgtgaaggtattaaaacatgtgagacctaactgtatagtgatggtagtgttaccaggaaggactgatagt gaaggggatcataatgctgtatgtctatgcaaagttacataa |
|
Protein
| Protein ID | pfu_aug1.0_13074.1_39435.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13074.1_39435.t1 MGISKDSYKNFKYTNKKYSTVTSQSPMFGLDCEMCMTTAKRPELTWVSVINENLETVYNTLVKPYNKVTNYLTRWSGITK ALLDPVNKRLEEVQRDLQKLLPPDAILCGQSLQCDLLALQVNHTLMTFVCEIFNKPLRPDSFSTALVADKEVVDYFGRND IASMESDSDKTTKSLTKSYVQYHDFVYSSFPSFKQCNTKEMTEENKKKLLWKMSRKVVKVLKHVRPNCIVMVVLPGRTDS EGDHNAVCLCKVT |
|