Gene
Gene Model ID | pfu_aug1.0_13074.1_39436 |
---|---|
Locus | scaffold13074.1 : 17806 ... 24846 : + |
To GenomeBrowser | scaffold13074.1:17806..24846 |
Genes list of scaffold | scaffold13074.1 |
Synonym | NA |
Manual annotation
Study field | Reproduction |
---|---|
Gene name | Pifuc-nanos-like A |
Description | Reciprocal BLASTP best hit to NCBI Accession BAF73619 (Bombyx mori). |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_13074.1_39436.t1 | 2 | 1 | zf-nanos | 129 | 182 | 1.8e-25 | 88.6 | 3.6e-29 | 1.8e-25 | 88.6 |
pfu_aug1.0_13074.1_39436.t1 | 2 | 2 | zf-nanos | 183 | 193 | 1.8e-25 | 88.6 | 0.34 | 1700.0 | -1.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
8-16cell | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_13074.1_39436.t1 |
---|---|
Definition | - |
>pfu_aug1.0_13074.1_39436.t1 atgaaaatcaagtataaagttgtgacggactttaatcacagaagggctctctccaagcaacttgacaacctgcttgatgg tcgcaacaaccttgatccactcaacgacaccttgatggacaacagcttcagagagcacttcacctacgcggcgccccaga cgactacacactgccacgatcgtgacttaccaccaacattcattgaccacacaacccatatccattcacatacaacagat gctagcctatctacctatttcccgtactgtgctgacattgcgccaccaaagaagtcacgtttaccgtcatctactaacat ggacgttgtcattgatgctggactacttaatccgaatcaacgacttcagtacgacgagaagttttgtgctctgtgtaagc gtaacggtgaagccagagagttctacactactcacgttctgaaagacaaccgtggtaaagttgtgtgtcctatccttcgt aaatacgtgtgtccgaaatgtggtgccacgggcgataacagccatactatcaagcactgtccgaccaccaaggaccgttc tcacaacaaccaacactgctaa |
Protein
Protein ID | pfu_aug1.0_13074.1_39436.t1 |
---|---|
Definition | - |
>pfu_aug1.0_13074.1_39436.t1 MKIKYKVVTDFNHRRALSKQLDNLLDGRNNLDPLNDTLMDNSFREHFTYAAPQTTTHCHDRDLPPTFIDHTTHIHSHTTD ASLSTYFPYCADIAPPKKSRLPSSTNMDVVIDAGLLNPNQRLQYDEKFCALCKRNGEAREFYTTHVLKDNRGKVVCPILR KYVCPKCGATGDNSHTIKHCPTTKDRSHNNQHC |