Gene
| Gene Model ID | pfu_aug1.0_13074.1_39436 |
|---|---|
| Locus | scaffold13074.1 : 17806 ... 24846 : + |
| To GenomeBrowser | scaffold13074.1:17806..24846 |
| Genes list of scaffold | scaffold13074.1 |
| Synonym | NA |
Manual annotation
| Study field | Reproduction |
|---|---|
| Gene name | Pifuc-nanos-like A |
| Description | Reciprocal BLASTP best hit to NCBI Accession BAF73619 (Bombyx mori). |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13074.1_39436.t1 | 2 | 1 | zf-nanos | 129 | 182 | 1.8e-25 | 88.6 | 3.6e-29 | 1.8e-25 | 88.6 |
| pfu_aug1.0_13074.1_39436.t1 | 2 | 2 | zf-nanos | 183 | 193 | 1.8e-25 | 88.6 | 0.34 | 1700.0 | -1.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_13074.1_39436.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13074.1_39436.t1 atgaaaatcaagtataaagttgtgacggactttaatcacagaagggctctctccaagcaacttgacaacctgcttgatgg tcgcaacaaccttgatccactcaacgacaccttgatggacaacagcttcagagagcacttcacctacgcggcgccccaga cgactacacactgccacgatcgtgacttaccaccaacattcattgaccacacaacccatatccattcacatacaacagat gctagcctatctacctatttcccgtactgtgctgacattgcgccaccaaagaagtcacgtttaccgtcatctactaacat ggacgttgtcattgatgctggactacttaatccgaatcaacgacttcagtacgacgagaagttttgtgctctgtgtaagc gtaacggtgaagccagagagttctacactactcacgttctgaaagacaaccgtggtaaagttgtgtgtcctatccttcgt aaatacgtgtgtccgaaatgtggtgccacgggcgataacagccatactatcaagcactgtccgaccaccaaggaccgttc tcacaacaaccaacactgctaa |
|
Protein
| Protein ID | pfu_aug1.0_13074.1_39436.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13074.1_39436.t1 MKIKYKVVTDFNHRRALSKQLDNLLDGRNNLDPLNDTLMDNSFREHFTYAAPQTTTHCHDRDLPPTFIDHTTHIHSHTTD ASLSTYFPYCADIAPPKKSRLPSSTNMDVVIDAGLLNPNQRLQYDEKFCALCKRNGEAREFYTTHVLKDNRGKVVCPILR KYVCPKCGATGDNSHTIKHCPTTKDRSHNNQHC |
|