Gene
| Gene Model ID | pfu_aug1.0_13087.1_39438 |
|---|---|
| Locus | scaffold13087.1 : 735 ... 8235 : - |
| To GenomeBrowser | scaffold13087.1:735..8235 |
| Genes list of scaffold | scaffold13087.1 |
| Synonym | pfu_aug2.0_1422.1_08371 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13087.1_39438.t1 | 7 | 1 | LRR_8 | 61 | 100 | 5.8e-29 | 99.6 | 6.1e-07 | 0.0013 | 18.4 |
| pfu_aug1.0_13087.1_39438.t1 | 8 | 1 | LRR_4 | 80 | 109 | 1.0e-18 | 66.5 | 0.0042 | 9.0 | 6.0 |
| pfu_aug1.0_13087.1_39438.t1 | 11 | 1 | LRR_1 | 92 | 109 | 1.7e-09 | 36.3 | 0.24 | 510.0 | 1.4 |
| pfu_aug1.0_13087.1_39438.t1 | 7 | 2 | LRR_8 | 134 | 149 | 5.8e-29 | 99.6 | 0.02 | 41.0 | 4.0 |
| pfu_aug1.0_13087.1_39438.t1 | 8 | 2 | LRR_4 | 134 | 149 | 1.0e-18 | 66.5 | 0.017 | 36.0 | 4.1 |
| pfu_aug1.0_13087.1_39438.t1 | 7 | 3 | LRR_8 | 140 | 202 | 5.8e-29 | 99.6 | 4.3e-09 | 9.0e-06 | 25.3 |
| pfu_aug1.0_13087.1_39438.t1 | 11 | 2 | LRR_1 | 140 | 160 | 1.7e-09 | 36.3 | 0.043 | 92.0 | 3.6 |
| pfu_aug1.0_13087.1_39438.t1 | 8 | 3 | LRR_4 | 168 | 211 | 1.0e-18 | 66.5 | 3.2e-06 | 0.0068 | 16.0 |
| pfu_aug1.0_13087.1_39438.t1 | 11 | 3 | LRR_1 | 168 | 189 | 1.7e-09 | 36.3 | 0.00011 | 0.24 | 11.5 |
| pfu_aug1.0_13087.1_39438.t1 | 11 | 4 | LRR_1 | 193 | 207 | 1.7e-09 | 36.3 | 0.35 | 750.0 | 0.9 |
| pfu_aug1.0_13087.1_39438.t1 | 8 | 4 | LRR_4 | 240 | 263 | 1.0e-18 | 66.5 | 0.00041 | 0.87 | 9.2 |
| pfu_aug1.0_13087.1_39438.t1 | 7 | 4 | LRR_8 | 252 | 282 | 5.8e-29 | 99.6 | 0.00055 | 1.2 | 8.9 |
| pfu_aug1.0_13087.1_39438.t1 | 11 | 5 | LRR_1 | 252 | 268 | 1.7e-09 | 36.3 | 0.0051 | 11.0 | 6.5 |
| pfu_aug1.0_13087.1_39438.t1 | 8 | 5 | LRR_4 | 277 | 317 | 1.0e-18 | 66.5 | 0.06 | 130.0 | 2.3 |
| pfu_aug1.0_13087.1_39438.t1 | 11 | 6 | LRR_1 | 277 | 288 | 1.7e-09 | 36.3 | 0.54 | 1100.0 | 0.3 |
| pfu_aug1.0_13087.1_39438.t1 | 8 | 6 | LRR_4 | 395 | 433 | 1.0e-18 | 66.5 | 9.9e-05 | 0.21 | 11.2 |
| pfu_aug1.0_13087.1_39438.t1 | 7 | 5 | LRR_8 | 418 | 453 | 5.8e-29 | 99.6 | 5.7e-07 | 0.0012 | 18.5 |
| pfu_aug1.0_13087.1_39438.t1 | 11 | 7 | LRR_1 | 418 | 432 | 1.7e-09 | 36.3 | 0.083 | 180.0 | 2.8 |
| pfu_aug1.0_13087.1_39438.t1 | 8 | 7 | LRR_4 | 442 | 484 | 1.0e-18 | 66.5 | 2.3e-08 | 5.0e-05 | 22.8 |
| pfu_aug1.0_13087.1_39438.t1 | 11 | 8 | LRR_1 | 443 | 466 | 1.7e-09 | 36.3 | 0.0088 | 19.0 | 5.8 |
| pfu_aug1.0_13087.1_39438.t1 | 7 | 6 | LRR_8 | 459 | 506 | 5.8e-29 | 99.6 | 7.8e-14 | 1.7e-10 | 40.5 |
| pfu_aug1.0_13087.1_39438.t1 | 11 | 9 | LRR_1 | 472 | 493 | 1.7e-09 | 36.3 | 2.0e-05 | 0.042 | 13.8 |
| pfu_aug1.0_13087.1_39438.t1 | 8 | 8 | LRR_4 | 495 | 532 | 1.0e-18 | 66.5 | 1.9e-06 | 0.0041 | 16.7 |
| pfu_aug1.0_13087.1_39438.t1 | 11 | 10 | LRR_1 | 495 | 516 | 1.7e-09 | 36.3 | 0.045 | 96.0 | 3.6 |
| pfu_aug1.0_13087.1_39438.t1 | 7 | 7 | LRR_8 | 514 | 542 | 5.8e-29 | 99.6 | 0.0033 | 6.9 | 6.5 |
| pfu_aug1.0_13087.1_39438.t1 | 11 | 11 | LRR_1 | 522 | 534 | 1.7e-09 | 36.3 | 0.011 | 24.0 | 5.5 |
| pfu_aug1.0_13087.1_39438.t1 | 1 | 1 | TIR | 676 | 808 | 2.7e-25 | 88.4 | 2.7e-28 | 5.8e-25 | 87.3 |
| pfu_aug1.0_13087.1_39438.t1 | 1 | 1 | TIR_2 | 676 | 775 | 1.1e-14 | 54.4 | 9.3e-18 | 2.0e-14 | 53.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13087.1_39438.t1 | gi|348538048|ref|XP_003456504.1| | 1.0e-38 |
Transcript
| Transcript ID | pfu_aug1.0_13087.1_39438.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13087.1_39438.t1 atgacaattatagataatgacaatatgcctacatacagcacaaagtcgataattaagaaaatcataaatcgaaggcatag aaatcaggataaaacaggaactaaagcaaacaaacaaaaacctccacaaaatgaaaagaaggtaattcccgatatgggag taataccagttaatgttacaggtcgaccgtttagaaaatttcacaagttggacgaattaattctccaaaacttgcacaca agtgtaccatcagctttgcttgagggattagaaaaattaaggactcttgatgtcaagggattgaatataaccagtggtga aaatcttacagacttattggaatatgttccgactttacaggatttaagaataaatggactacagaaacctttcagttcag gcatgaggaaattaattcatctaagaaaacttgacttgtctggtacagtaggtgaatgtcacgtacataccctgcatcca ttgtattttgagaatataaggaacataacacatcttgatgtatcgtattgtcatttaacagaaattcatcggaattctat ttcaaagtttcagtttctacatttcttggatgtttcctacaatgaggaaatgacattcagcgtgctaaaaaatatcactc tagatattaaactgaccaaaattgaagtattaaaactcgataagattcactgcacatttggagtcggaacagaaattttg accagcgacttggcgaatttgacgaacaccccattaagatatctttctttgaacagcaaccgcttagaaatgattcaaaa gggggtattactcaagatgccatggacactacaacatttatctgtggttgataataaatttacaatgggttcatacatgt atgaggtgatgtttttgtcaaacttggtgactttaaatgcaagtttcttgtctcaaacacataatccaatataccttaga aattgtcatgaaaaaacaaaccgtagatgctacttcacctcagcaaaatatcaagttgatcattattccgattacaaaga gcatacttattcacatgatacgtcgacgattgagcgaaatccattcatcgattgctttcctctgccgagaaatatacaaa atgtttttgctgcacaagcaaatttaagatatctaattccatcaataaagttttgtccgaataatgttagagaagtgcgt ttacaaggtaacattttgaaccaatggttcggaccaatagaaaatgcggaaaatgttacactcttggaccttagcaataa tgtttgcacagaagtaacaacatatttcttcaagtactttaaagggctagaataccttgacgtaagcaggaatttacttg gagatagcttgaagacagacatctctggagaaacttttcaatatctaaaactattgaagtatcttgatctcagctttaac cgaataagtgttttgtcatcgcatgtgttcaaatcgctcgtaaacttgaggcagttgaaactcagggataacctgattga agattttaaaaatgtggaactggagcatttatctggtcttttattacttgatctatctggaaatcaattaccgactttaa accttgatataagaaaatctctgagtgagattcggaaacattcacatttaaaaatcaatattaccagtaacccacttcgt tgtaactgtgaggatattgacttttggaggtggatgtcggattctgatttcattcttgatgcccatggagtcacgtgtaa agttggaaagctaaaacatttcttcaaaaattccacaaaagtagcggacattattatacaaatggataaactttgtgcca gctatgttggtattgtggcgggagtctcttgtacaataggtcttctgatagccctgatcataggcggaactgtttatcga tatcgttggaagttaaggtatcttttttacatgacgaaaagtaaatattttggatatgccgaaatgggtcgggattataa cgagcggaatttcatattcgactgcttcatttcatacgctgatgaggatagaggatttgccctccataatgtgatgaact acctggagaaaaccaccggacttaaattgtgctttcaccaacgtgattttgtgcctggaatcgacatagcacagaatatt acaaatgctattcaccaaagtcgaaaaacaatttgcgttttgtctcctaattacctgaaatcgtactggtgcatgtacga actcaatatggcgaagatggagagcatttattcgcgtaatggagaaaacatacttattcttgtattctatcagcacgtca accctgatgatattcccttgaacgtcatgtcaattatcgaacaaaaatcctacatcgaatatcccgatgatgaacaaggt gacatcgttttctggaataaattgaaagaagtcatagagctttga |
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Protein
| Protein ID | pfu_aug1.0_13087.1_39438.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13087.1_39438.t1 MTIIDNDNMPTYSTKSIIKKIINRRHRNQDKTGTKANKQKPPQNEKKVIPDMGVIPVNVTGRPFRKFHKLDELILQNLHT SVPSALLEGLEKLRTLDVKGLNITSGENLTDLLEYVPTLQDLRINGLQKPFSSGMRKLIHLRKLDLSGTVGECHVHTLHP LYFENIRNITHLDVSYCHLTEIHRNSISKFQFLHFLDVSYNEEMTFSVLKNITLDIKLTKIEVLKLDKIHCTFGVGTEIL TSDLANLTNTPLRYLSLNSNRLEMIQKGVLLKMPWTLQHLSVVDNKFTMGSYMYEVMFLSNLVTLNASFLSQTHNPIYLR NCHEKTNRRCYFTSAKYQVDHYSDYKEHTYSHDTSTIERNPFIDCFPLPRNIQNVFAAQANLRYLIPSIKFCPNNVREVR LQGNILNQWFGPIENAENVTLLDLSNNVCTEVTTYFFKYFKGLEYLDVSRNLLGDSLKTDISGETFQYLKLLKYLDLSFN RISVLSSHVFKSLVNLRQLKLRDNLIEDFKNVELEHLSGLLLLDLSGNQLPTLNLDIRKSLSEIRKHSHLKINITSNPLR CNCEDIDFWRWMSDSDFILDAHGVTCKVGKLKHFFKNSTKVADIIIQMDKLCASYVGIVAGVSCTIGLLIALIIGGTVYR YRWKLRYLFYMTKSKYFGYAEMGRDYNERNFIFDCFISYADEDRGFALHNVMNYLEKTTGLKLCFHQRDFVPGIDIAQNI TNAIHQSRKTICVLSPNYLKSYWCMYELNMAKMESIYSRNGENILILVFYQHVNPDDIPLNVMSIIEQKSYIEYPDDEQG DIVFWNKLKEVIEL |
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