Gene
| Gene Model ID | pfu_aug1.0_13100.1_39441 |
|---|---|
| Locus | scaffold13100.1 : 616 ... 13473 : + |
| To GenomeBrowser | scaffold13100.1:616..13473 |
| Genes list of scaffold | scaffold13100.1 |
| Synonym | pfu_aug2.0_2819.1_32316 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13100.1_39441.t1 | 2 | 1 | PDZ | 136 | 207 | 1.2e-15 | 57.3 | 7.7e-17 | 5.7e-13 | 48.8 |
| pfu_aug1.0_13100.1_39441.t1 | 2 | 2 | PDZ | 261 | 284 | 1.2e-15 | 57.3 | 0.0014 | 11.0 | 6.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13100.1_39441.t1 | gi|291239965|ref|XP_002739893.1| | 3.0e-34 |
Transcript
| Transcript ID | pfu_aug1.0_13100.1_39441.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13100.1_39441.t1 atgggtactattgaaatagatgaacgaaaaaagctggccatcgaggagttccaccgagcaacagaagaactgttgtctaa ttcagagtgctatactttatataggatccttaaaacctaccaacgacagagaagggtggataatttggtgaagggagttc tagatgtcatggagtcacgagacaaacagaggctgcttccttatttgaggaacatccttcccagagtccatcttgaggag tttgacaaactgttactcctcttcagatccaggaggcgcaatgaaagccgaaactatttacaggtggaggataggcggtc tcttcacagccaaagaagtgagagaccatttgatgatgtcagtatgacgtcagaggtggatgtgataatgctttataagg acccacgatccccaaaccttggatttagtatcagaggcggatcggagcatgggcttggggtgtatgtcagtgatgtggaa agagggtccgtggcagatgtctgcggcttggcggttggtgataaactactggaggtaaataacataagcttcaagaatct ggccagtagcagcgctaccaaagtccttactggtaccaatcagttaaaactagtggtggagaaaacaggacaagtaccgg agtggagaatttcgaaagaaaagactgcatggtatgacagtcataaacagaagcttgtccagggtgactttgaggaatgt ggcactgcgaatttcattcgcggtttggacgtggacgttccagagaggagagttacgttagagaacaacggcgaacttgg atttaatattaggggaggcaatgagtatggtcttggcatttacgtttcaagttcggattgctatggattgctacgggttg atacgaatcgagtacggatagctaagtattgctacggatatcgtcccgatattgctacggatcgctacgacacgcacgaa cacggtcacttctacatcaaaccaactgagcagcacgaacatgaacagagaacgaaacagaaagtaatagagataatgtc cagtcaaaaaagccaagattacgagatgaccagtatgtcgtccggctcatcatttagacaggagtccataaaaagaactg ataagtttgcagcatggatcagacatgcacgtttcgggtacttgaccctcgtcagtgaccctcaatctaagcaatgtaat atggccaaagagtgtgaacattattatgcctaa |
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Protein
| Protein ID | pfu_aug1.0_13100.1_39441.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13100.1_39441.t1 MGTIEIDERKKLAIEEFHRATEELLSNSECYTLYRILKTYQRQRRVDNLVKGVLDVMESRDKQRLLPYLRNILPRVHLEE FDKLLLLFRSRRRNESRNYLQVEDRRSLHSQRSERPFDDVSMTSEVDVIMLYKDPRSPNLGFSIRGGSEHGLGVYVSDVE RGSVADVCGLAVGDKLLEVNNISFKNLASSSATKVLTGTNQLKLVVEKTGQVPEWRISKEKTAWYDSHKQKLVQGDFEEC GTANFIRGLDVDVPERRVTLENNGELGFNIRGGNEYGLGIYVSSSDCYGLLRVDTNRVRIAKYCYGYRPDIATDRYDTHE HGHFYIKPTEQHEHEQRTKQKVIEIMSSQKSQDYEMTSMSSGSSFRQESIKRTDKFAAWIRHARFGYLTLVSDPQSKQCN MAKECEHYYA |
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