Gene
| Gene Model ID | pfu_aug1.0_13115.1_61155 |
|---|---|
| Locus | scaffold13115.1 : 450 ... 6155 : - |
| To GenomeBrowser | scaffold13115.1:450..6155 |
| Genes list of scaffold | scaffold13115.1 |
| Synonym | pfu_aug2.0_2510.1_02157 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13115.1_61155.t1 | 2 | 1 | Ank_2 | 48 | 85 | 4.0e-21 | 75.1 | 4.5e-08 | 0.00013 | 22.1 |
| pfu_aug1.0_13115.1_61155.t1 | 3 | 1 | Ank | 55 | 85 | 8.8e-26 | 88.3 | 2.7e-10 | 7.9e-07 | 28.5 |
| pfu_aug1.0_13115.1_61155.t1 | 3 | 1 | Ank_3 | 55 | 84 | 3.7e-16 | 57.6 | 2.3e-06 | 0.0068 | 16.5 |
| pfu_aug1.0_13115.1_61155.t1 | 3 | 1 | Ank_5 | 55 | 87 | 3.2e-14 | 52.6 | 7.1e-06 | 0.021 | 15.0 |
| pfu_aug1.0_13115.1_61155.t1 | 2 | 1 | Ank_4 | 56 | 85 | 4.1e-18 | 65.3 | 5.0e-06 | 0.015 | 15.8 |
| pfu_aug1.0_13115.1_61155.t1 | 3 | 2 | Ank | 94 | 125 | 8.8e-26 | 88.3 | 1.1e-12 | 3.1e-09 | 36.1 |
| pfu_aug1.0_13115.1_61155.t1 | 3 | 2 | Ank_5 | 94 | 135 | 3.2e-14 | 52.6 | 1.3e-11 | 4.0e-08 | 33.2 |
| pfu_aug1.0_13115.1_61155.t1 | 3 | 2 | Ank_3 | 95 | 121 | 3.7e-16 | 57.6 | 3.0e-09 | 8.8e-06 | 25.4 |
| pfu_aug1.0_13115.1_61155.t1 | 2 | 2 | Ank_2 | 97 | 156 | 4.0e-21 | 75.1 | 3.8e-17 | 1.1e-13 | 51.2 |
| pfu_aug1.0_13115.1_61155.t1 | 2 | 2 | Ank_4 | 97 | 147 | 4.1e-18 | 65.3 | 7.7e-16 | 2.3e-12 | 47.0 |
| pfu_aug1.0_13115.1_61155.t1 | 3 | 3 | Ank | 129 | 156 | 8.8e-26 | 88.3 | 1.2e-07 | 0.00036 | 20.1 |
| pfu_aug1.0_13115.1_61155.t1 | 3 | 3 | Ank_3 | 129 | 154 | 3.7e-16 | 57.6 | 6.3e-05 | 0.19 | 12.0 |
| pfu_aug1.0_13115.1_61155.t1 | 3 | 3 | Ank_5 | 130 | 157 | 3.2e-14 | 52.6 | 0.0005 | 1.5 | 9.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13115.1_61155.t1 | gi|303324764|pdb|2XEE|A | Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. | 2.0e-14 |
Transcript
| Transcript ID | pfu_aug1.0_13115.1_61155.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13115.1_61155.t1 atgcaagaattaccgtgctctgacgttcacggcgacacgtcaaatctagctaccaccgtttttgcccttatgaaagaaaa tgagacgaagcttatcagacaagctaatgcatttgtgaagaaaaacaagtcgcgggctcgacaaatttttgaaactgttg tagacggatggacccctctccacgcatgcgcgttaagaggtagcaaaaagctgttaaaaacaatgcttggtgctggatca gacataaatattcggatgggtcatccagagggactacctgaccagtgtacgttgctacatatcgcttgtcatcgaggtga tttaaaaatatgtgaacttctattgtcacgtggtgctgacgtcacttcgaaagacggaaattgcagaacgcccgtatatt acgccgcaaaacgccgtcacaaaagggtgatcaagttactagagaaaaaaggtgcggacgtttcgaacgttgagaaatgg gcgccaaatatatcaaatgagtgtgagactcctctccccaccacgtcagggttctgtttcttttggtga |
|
Protein
| Protein ID | pfu_aug1.0_13115.1_61155.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13115.1_61155.t1 MQELPCSDVHGDTSNLATTVFALMKENETKLIRQANAFVKKNKSRARQIFETVVDGWTPLHACALRGSKKLLKTMLGAGS DINIRMGHPEGLPDQCTLLHIACHRGDLKICELLLSRGADVTSKDGNCRTPVYYAAKRRHKRVIKLLEKKGADVSNVEKW APNISNECETPLPTTSGFCFFW |
|