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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_131178.1_13830
Locus scaffold131178.1 : 1 ... 1081 : +
To GenomeBrowser scaffold131178.1:1..1081
Genes list of scaffold scaffold131178.1
Synonym pfu_aug2.0_28.1_26686

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_131178.1_13830.t1 1 1 Oxysterol_BP 1 64 1.6e-14 53.1 1.2e-18 1.7e-14 53.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_131178.1_13830.t1 gi|321467766|gb|EFX78755.1| hypothetical protein DAPPUDRAFT_225360 [Daphnia pulex] 2.0e-25

Transcript
Transcript IDpfu_aug1.0_131178.1_13830.t1
Definition-
>pfu_aug1.0_131178.1_13830.t1
gtaactccctttcggctatattagatggcacggccaagctgacgtttctgaagagaggggaggactactacatcaccatg
ccgtacgcacactgtaaaggtattttgattgggaccttgacaatggagatgggaggaaaggtgtccatagactgtcctaa
aactggctacagggcagacctggaattcaaacttaag

Protein
Protein IDpfu_aug1.0_131178.1_13830.t1
Definition-
>pfu_aug1.0_131178.1_13830.t1
NSLSAILDGTAKLTFLKRGEDYYITMPYAHCKGILIGTLTMEMGGKVSIDCPKTGYRADLEFKLK

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