Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_13130.1_39449
Locus scaffold13130.1 : 10083 ... 14245 : -
To GenomeBrowser scaffold13130.1:10083..14245
Genes list of scaffold scaffold13130.1
Synonym pfu_aug2.0_388.1_27330

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_13130.1_39449.t1 gi|260812024|ref|XP_002600721.1| hypothetical protein BRAFLDRAFT_83463 [Branchiostoma floridae] 5.0e-13

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_13130.1_39449.t1
Definition-
>pfu_aug1.0_13130.1_39449.t1
acactagttctggggagttgttctgtaagctgacagggttatgccccttgattcctatgtatggtatggacgacatttca
gagattctcgatctcatctctaacactggagccgatactgtatcaaaagccagacccctcaaaatactcaactacctaca
gggggaggcagtcagaatggccaggcagctaaccaaggatcaaagtaaagaggagatactgatgttgttagaatcaatac
gtgacactctacctgaaaattgtgatagctgctttcatggaaaactacttcttctatga

Protein
Protein IDpfu_aug1.0_13130.1_39449.t1
Definition-
>pfu_aug1.0_13130.1_39449.t1
TSSGELFCKLTGLCPLIPMYGMDDISEILDLISNTGADTVSKARPLKILNYLQGEAVRMARQLTKDQSKEEILMLLESIR
DTLPENCDSCFHGKLLLL

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