Gene
| Gene Model ID | pfu_aug1.0_1314.1_00685 |
|---|---|
| Locus | scaffold1314.1 : 28777 ... 48460 : - |
| To GenomeBrowser | scaffold1314.1:28777..48460 |
| Genes list of scaffold | scaffold1314.1 |
| Synonym | pfu_aug2.0_2839.1_32321 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1314.1_00685.t1 | 2 | 1 | HECT | 53 | 185 | 0.0 | 218.1 | 2.0e-38 | 2.9e-34 | 118.6 |
| pfu_aug1.0_1314.1_00685.t1 | 2 | 2 | HECT | 184 | 271 | 0.0 | 218.1 | 1.7e-32 | 2.6e-28 | 99.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1314.1_00685.t1 | gi|119612041|gb|EAW91635.1| | WW domain containing E3 ubiquitin protein ligase 1, isoform CRA_b [Homo sapiens] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1314.1_00685.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1314.1_00685.t1 ctaacagtgacaggaaaatcaattttgtcgaactaaataatacttcaaatactcgtttattccggaattataactatcgt ttggtacaaagttcttggaatctgtttattattccattgcatttcccggtatttcaagtgaaggtatcaaatatccaggc tttataccatgggaagtttattgatagcggttttactttacctttctacaaacgaatgctgaacaaaaaactgtacctca aagacatagagacgatcgatccagagttttataattcccttgtttggatacaagataatgaaatagaagaatgtggttta gagctttacttctcggctgactttgagattttgggtaaagtagaagcacataatctgaaggaaggaggagctgatataaa agtcactgatgaaaataaagaggaatatatcaacttaatgacaaactggaggttttctcgaggagtagaagatcaagcta aagctttcctggacggcttcagtgaagtcgtaccgttacaatggctgcagtattttgatgaaagggagcttgagtttgtg agggagatagacaatgaaaagaagattcgacttctacagtttgttactggcacatgtcgattaccagtcggtggttttgc cgagttaatggggagcaacggtccacaaagattttgtatagagaaagttggcaaggagacttggctaccacgtagtcata cctgctttaatcgattagatttacccccgtaccgtagttacgaacaattagtggaaaaactaacaatggccatagaggaa acggagggcttcggacaggaatga |
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Protein
| Protein ID | pfu_aug1.0_1314.1_00685.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1314.1_00685.t1 NSDRKINFVELNNTSNTRLFRNYNYRLVQSSWNLFIIPLHFPVFQVKVSNIQALYHGKFIDSGFTLPFYKRMLNKKLYLK DIETIDPEFYNSLVWIQDNEIEECGLELYFSADFEILGKVEAHNLKEGGADIKVTDENKEEYINLMTNWRFSRGVEDQAK AFLDGFSEVVPLQWLQYFDERELEFVREIDNEKKIRLLQFVTGTCRLPVGGFAELMGSNGPQRFCIEKVGKETWLPRSHT CFNRLDLPPYRSYEQLVEKLTMAIEETEGFGQE |
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