Gene
| Gene Model ID | pfu_aug1.0_131421.1_71771 |
|---|---|
| Locus | scaffold131421.1 : 1 ... 1017 : + |
| To GenomeBrowser | scaffold131421.1:1..1017 |
| Genes list of scaffold | scaffold131421.1 |
| Synonym | pfu_aug2.0_1321.1_04963 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_131421.1_71771.t1 | 1 | 1 | DEAD | 5 | 101 | 1.6e-19 | 70.0 | 4.0e-23 | 2.0e-19 | 69.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_131421.1_71771.t1 | gi|156405006|ref|XP_001640523.1| | predicted protein [Nematostella vectensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_131421.1_71771.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_131421.1_71771.t1 gttatccttgccttgggagattacatgaacgttcagtgtcatgcctgtattggaggtacaaatgtcggtgaagatatccg taaacttgactatggtcagcatgtagtatcgggcactccaggaagggtttttgacatgattagaagacgtaacttgagaa caaggtcgatcaaaatgctggtgttagatgaagcagatgaaatgttgaataagggttttaaggagcaaatctatgatgta tacaggtaccttcctccagcgacccaggtagttctgatctctgccacactaccacatgaaatcctggaaatgaccagtaa attcatgacagaccctatcagaatcctagtcaaacggtgtgtgaagaaatttttatga |
|
Protein
| Protein ID | pfu_aug1.0_131421.1_71771.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_131421.1_71771.t1 VILALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRSIKMLVLDEADEMLNKGFKEQIYDV YRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRCVKKFL |
|