Gene
| Gene Model ID | pfu_aug1.0_131504.1_71776 |
|---|---|
| Locus | scaffold131504.1 : 1 ... 705 : - |
| To GenomeBrowser | scaffold131504.1:1..705 |
| Genes list of scaffold | scaffold131504.1 |
| Synonym | pfu_aug2.0_314.1_13981 |
Manual annotation
| Study field | other developmental genes |
|---|---|
| Gene name | |
| Description | High BLAST hits to various organisms Tbx1 and Tbx10. Simple NJ tree also showed an affinity to HsTbx1 and HsTbx10 |
| mRNA evidence |
| Study field | other developmental genes |
|---|---|
| Gene name | Tbx1/10 |
| Description | High BLAST hits to various organisms Tbx1 and Tbx10. Simple NJ tree also showed an affinity to HsTbx1 and HsTbx10 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_131504.1_71776.t1 | 1 | 1 | T-box | 1 | 90 | 1.0e-35 | 122.8 | 7.80001e-40 | 1.2e-35 | 122.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_131504.1_71776.t1 | gi|242025118|ref|XP_002432973.1| | T-box protein, putative [Pediculus humanus corporis] | 3.99931e-42 |
Transcript
| Transcript ID | pfu_aug1.0_131504.1_71776.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_131504.1_71776.t1 atgtttcccacatttcaagtgcgcctgtacggactggatccaatggcggattacatggtgatgatggactttgtgccgtg tgatgacaagcgatataggtattccttccatagctctagctgggtggtggccgggaaggcggatccacacatgccggggc ggatccatgtccaccccgactcccccgccaagggatcacaatggatgaagcaggtggtttcctttgacaaactcaaactg accaataatttgatggatgacaacggccat |
|
Protein
| Protein ID | pfu_aug1.0_131504.1_71776.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_131504.1_71776.t1 MFPTFQVRLYGLDPMADYMVMMDFVPCDDKRYRYSFHSSSWVVAGKADPHMPGRIHVHPDSPAKGSQWMKQVVSFDKLKL TNNLMDDNGH |
|