Gene
| Gene Model ID | pfu_aug1.0_13156.1_32300 |
|---|---|
| Locus | scaffold13156.1 : 20116 ... 24321 : + |
| To GenomeBrowser | scaffold13156.1:20116..24321 |
| Genes list of scaffold | scaffold13156.1 |
| Synonym | pfu_aug2.0_325.1_17296 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13156.1_32300.t1 | 1 | 1 | DUF3456 | 2 | 68 | 2.7e-12 | 46.9 | 4.0e-16 | 3.0e-12 | 46.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13156.1_32300.t1 | gi|240848951|ref|NP_001155398.1| | protein canopy homolog 4-like precursor [Acyrthosiphon pisum] | 5.0e-22 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_13156.1_32300.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13156.1_32300.t1 atggatacattgcatggtttagtgaacaaaggtgtaaaggtagagctaggtattccttatgaactttgggatgaaccatc tgtggagataacagacatgcaaagaaagtgtaataacatggcagagagatatgaggacgatatagaggactggtactata attaccaagataaagatctcatgaagtatttatgtgtagacagagtacttagaaaagatgatacaggtgaggttctgaat gtaacaggaggatggacagtgtatatatga |
|
Protein
| Protein ID | pfu_aug1.0_13156.1_32300.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13156.1_32300.t1 MDTLHGLVNKGVKVELGIPYELWDEPSVEITDMQRKCNNMAERYEDDIEDWYYNYQDKDLMKYLCVDRVLRKDDTGEVLN VTGGWTVYI |
|