Gene
| Gene Model ID | pfu_aug1.0_13158.1_17960 |
|---|---|
| Locus | scaffold13158.1 : 4166 ... 13827 : + |
| To GenomeBrowser | scaffold13158.1:4166..13827 |
| Genes list of scaffold | scaffold13158.1 |
| Synonym | pfu_aug2.0_3482.1_09157 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13158.1_17960.t1 | 2 | 1 | zf-B_box | 14 | 58 | 1.0e-15 | 57.3 | 2.5e-08 | 1.3e-05 | 24.9 |
| pfu_aug1.0_13158.1_17960.t1 | 2 | 2 | zf-B_box | 74 | 112 | 1.0e-15 | 57.3 | 2.1e-12 | 1.1e-09 | 37.9 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_13158.1_17960.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13158.1_17960.t1 atgagtgaccaaggcgccacagtgttccccgttcagacaatggtggaatgtggaatctgtggagggacctttaacgttga ttggttctgtaagacctgtggtggatccctttgtgacacatgctatcaggctcaccagagagcgtccctcttcaaaaatc atatagtggtaccacgaactgtggaagtcctaaggctacatggtccagcgaagattgccgaaatttgccgaatacatccg acaaaagaaatctctacctactgcaacgagtgcaagattccatgctgcgttttatgcttgactgaaaaacaccaacgcca cgccatttctccgatagaggacaagtatctatctgcagaaaaaggtctggaccagtatactagggagttgcaaacagatg ttaagcctagcctggatgccttaaaagacagtttgaaacatcgtctaaaaaaacacgatgagcagattgaaaaagaaagg gacgcgataaacacattaagacgtactctcaaacagaaagtagatgaatcatgtgatctgctcttgaaagaactcgatca agccaaacaggattttagaaactttgaaaaagaaatcgactccagtaaacaaagactagatcagttgataaaagatctcg agattatgataggggagggaaaattagatatcatagaatatttaccacccacccgcaaatctctcatcccggcgtctcct ttgtacccagtttactcctgggtggagagagtacaacgtagtgtaaagcaacttgcccaatgttacaatggttttgcaga gatcggcgacggtgagattcgaacccacgacctatggattcgtagtccaccgcgctaa |
|
Protein
| Protein ID | pfu_aug1.0_13158.1_17960.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13158.1_17960.t1 MSDQGATVFPVQTMVECGICGGTFNVDWFCKTCGGSLCDTCYQAHQRASLFKNHIVVPRTVEVLRLHGPAKIAEICRIHP TKEISTYCNECKIPCCVLCLTEKHQRHAISPIEDKYLSAEKGLDQYTRELQTDVKPSLDALKDSLKHRLKKHDEQIEKER DAINTLRRTLKQKVDESCDLLLKELDQAKQDFRNFEKEIDSSKQRLDQLIKDLEIMIGEGKLDIIEYLPPTRKSLIPASP LYPVYSWVERVQRSVKQLAQCYNGFAEIGDGEIRTHDLWIRSPPR |
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