Gene
| Gene Model ID | pfu_aug1.0_1316.1_51271 |
|---|---|
| Locus | scaffold1316.1 : 14556 ... 20445 : + |
| To GenomeBrowser | scaffold1316.1:14556..20445 |
| Genes list of scaffold | scaffold1316.1 |
| Synonym | pfu_aug2.0_383.1_10694 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1316.1_51271.t1 | 1 | 1 | Neur_chan_LBD | 23 | 219 | 1.5e-31 | 109.2 | 4.9e-35 | 2.4e-31 | 108.5 |
| pfu_aug1.0_1316.1_51271.t1 | 2 | 1 | Neur_chan_memb | 228 | 355 | 8.9e-17 | 61.7 | 3.1e-19 | 1.5e-15 | 57.7 |
| pfu_aug1.0_1316.1_51271.t1 | 2 | 2 | Neur_chan_memb | 348 | 402 | 8.9e-17 | 61.7 | 4.3e-05 | 0.21 | 11.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1316.1_51271.t1 | gi|260801717|ref|XP_002595742.1| | hypothetical protein BRAFLDRAFT_64870 [Branchiostoma floridae] | 9.0e-35 |
Transcript
| Transcript ID | pfu_aug1.0_1316.1_51271.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1316.1_51271.t1 atgatgttcgtcttccccatccctgcggtgtacatgaatggagtcaacattaaatcagcacttgacctccataaatacct gcttgcaaactactctactgacatccgacctgtccacagtgacagtcaacctctggatttacatgtatatgcctcacttg ttcaaattttccgcttggacgaactttccggtgagctagtttcaagtttggtgttatcattcacttggtttgacgaaagt ttgaaatgggatccagctgatttcgagggcaggtacaaaacagagattgacgttatgaagatttggagaccagccttaaa attaatgtcgccaagtcagaaaacagaacgactgggcaaacagggcgatatagctgtgataacttcttatggatctgttg ttatgtcacttagcgatatattctttacttcctgtgtggttcgtatcacattctttccttttgacatacagatatgtgac ctatggttcgctattccagaatatggcaaacaaataacatttactcctaactcacctgaaataggaagatcatttttctt tgaaaaccctatttggaatgttaaaaagacgactttgaaatctgtcgccatggaatataataacaatcttgtatgcagta tcgtattagaaagacgggcaacattttacatccttaatcttttaactcctatcataatactcatgattttgaacagcatg gtatttgcacttccggcggatagcggagaacgcgtagggttttccgttactctacttctatctattactgtttacatgac aattatatcggacaagatcccaaattcctccaaaccttcgcctatcctgacctacgtactggtatcatactttggacagt cagctttgatatgcttaaatactattctaagtttgaggatgcattcccatagcaacaaagaccctgtgccaccactgtta tccaatgttgtacgcatgttaagatgctgtatgtgttcttgtcgaaataaagaacaagaaaacaagatcaaacattgtga aaatgaacaaactgaaacaatttctaaccgtgaaaacaaggtagaaatctgcaacaaaaatgaaccgcaaagtgaaataa cgtggaaaaacgtagcttcttctttcgacaacatctttcttatttcgaatatatgcatatgtttcctcatagctgttgtt tatttctgcctcgttttattttatcgtacctga |
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Protein
| Protein ID | pfu_aug1.0_1316.1_51271.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1316.1_51271.t1 MMFVFPIPAVYMNGVNIKSALDLHKYLLANYSTDIRPVHSDSQPLDLHVYASLVQIFRLDELSGELVSSLVLSFTWFDES LKWDPADFEGRYKTEIDVMKIWRPALKLMSPSQKTERLGKQGDIAVITSYGSVVMSLSDIFFTSCVVRITFFPFDIQICD LWFAIPEYGKQITFTPNSPEIGRSFFFENPIWNVKKTTLKSVAMEYNNNLVCSIVLERRATFYILNLLTPIIILMILNSM VFALPADSGERVGFSVTLLLSITVYMTIISDKIPNSSKPSPILTYVLVSYFGQSALICLNTILSLRMHSHSNKDPVPPLL SNVVRMLRCCMCSCRNKEQENKIKHCENEQTETISNRENKVEICNKNEPQSEITWKNVASSFDNIFLISNICICFLIAVV YFCLVLFYRT |
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