Gene
| Gene Model ID | pfu_aug1.0_1316.1_51274 |
|---|---|
| Locus | scaffold1316.1 : 53536 ... 59733 : + |
| To GenomeBrowser | scaffold1316.1:53536..59733 |
| Genes list of scaffold | scaffold1316.1 |
| Synonym | pfu_aug2.0_383.1_10699 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1316.1_51274.t1 | 3 | 1 | Neur_chan_memb | 31 | 73 | 2.1e-14 | 54.0 | 0.41 | 3000.0 | -2.2 |
| pfu_aug1.0_1316.1_51274.t1 | 1 | 1 | Neur_chan_LBD | 129 | 312 | 1.6e-39 | 135.3 | 3.79752e-43 | 2.8e-39 | 134.5 |
| pfu_aug1.0_1316.1_51274.t1 | 3 | 2 | Neur_chan_memb | 331 | 419 | 2.1e-14 | 54.0 | 1.4e-17 | 1.1e-13 | 51.7 |
| pfu_aug1.0_1316.1_51274.t1 | 3 | 3 | Neur_chan_memb | 467 | 497 | 2.1e-14 | 54.0 | 0.0085 | 63.0 | 3.3 |
Transcript
| Transcript ID | pfu_aug1.0_1316.1_51274.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1316.1_51274.t1 atgatttttcggtacatctcttcaaactttattcttcactattttccctcaaaaataccttattttcatatgcggctcta tccaagccaaatgttcattttcgtgattattataatgttatatgttaacaaaagagatgaaagtctgatggagcaagatc aggcgaataaggcggatgtcacaatcatgaattgcagccatgacatggaacaacacatctttaatgagctttccgcggcg cttaagttgaacatttcccgtaactgtgtcagaagtgaagaatattatgcaccattgattgttggagataatcaatcttc agaataccttctttgttttgattcgttatttccattgacattctgcatgacgacaaaatctgaatacgatctacataccg tccttttttcgaattattcttcggacattcgtccagtgaacgacgagaaagccaaactgaccatcaatgttacggccttc cttacctcaatagttggattagacgaaccgtcagggcaacttgttaccaccatggcatttgtttttacttggattgacat aggcttattgtggagccccgacgactatgatggacggacgaatatttatgtggacttcagaagaatatggaccccaccta tatttcttttgaatcccagtcagagtttacagagacttggaaatgaaggagggaagaccccggtcagacacgacgggctt gtcacatggagtgttggagggattatgcattctacgtgccatgtagatgttacatactttccttttgatgaacaaaaatg cttgattaaattcaatgcgtttgaatatgaattcctgatagaatatcaaattttgcagagttcgatgaatatgttacttt tcaccgaaaatggagtgtggcaagtggaaaagactgaagtcacgacatatcagtacacaattatatgcactctgtatttg aaaagaaggtctactttttatcaactcaacattattactcctatcatgatcctggtgtttcttaacagcatggtgttctt gcttccagcagaaagcggtgagcgtgttggatttgcggtcaccattttgctctccgtttctgtgtatatgaccataattg ctgatagtctaccaagcacatccaagccagtgtctattttgaactacgtgctgatattctttcttactcaatcagcggtt atatgcattaaaacgataattggaattcgtatgtacgcaaaagcagatttgaggaaaacctcaacgttcctgcatggcat tgttaaactattcaagagtggatctttagtaagggtatgcgaggataggaaagttcatattgacaacgatacgaaggatg atagtgaaaagaaagcgatgggaatagattgtaagacgactcaagatgagaatgatagaaatgccattacatggacgctg gtggcagaagccttcgacagactgtcactatgtgtgaatttgatattaaccaatgtggtcgttgtggcttttatcgcagt cattgtaagaggaaccaagcattag |
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Protein
| Protein ID | pfu_aug1.0_1316.1_51274.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1316.1_51274.t1 MIFRYISSNFILHYFPSKIPYFHMRLYPSQMFIFVIIIMLYVNKRDESLMEQDQANKADVTIMNCSHDMEQHIFNELSAA LKLNISRNCVRSEEYYAPLIVGDNQSSEYLLCFDSLFPLTFCMTTKSEYDLHTVLFSNYSSDIRPVNDEKAKLTINVTAF LTSIVGLDEPSGQLVTTMAFVFTWIDIGLLWSPDDYDGRTNIYVDFRRIWTPPIFLLNPSQSLQRLGNEGGKTPVRHDGL VTWSVGGIMHSTCHVDVTYFPFDEQKCLIKFNAFEYEFLIEYQILQSSMNMLLFTENGVWQVEKTEVTTYQYTIICTLYL KRRSTFYQLNIITPIMILVFLNSMVFLLPAESGERVGFAVTILLSVSVYMTIIADSLPSTSKPVSILNYVLIFFLTQSAV ICIKTIIGIRMYAKADLRKTSTFLHGIVKLFKSGSLVRVCEDRKVHIDNDTKDDSEKKAMGIDCKTTQDENDRNAITWTL VAEAFDRLSLCVNLILTNVVVVAFIAVIVRGTKH |
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