Gene
| Gene Model ID | pfu_aug1.0_1316.1_51276 |
|---|---|
| Locus | scaffold1316.1 : 63416 ... 81335 : - |
| To GenomeBrowser | scaffold1316.1:63416..81335 |
| Genes list of scaffold | scaffold1316.1 |
| Synonym | pfu_aug2.0_383.1_10701 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1316.1_51276.t1 | 2 | 1 | Ald_Xan_dh_C2 | 46 | 211 | 1.26117e-44 | 152.6 | 4.90006e-41 | 7.2e-37 | 126.9 |
| pfu_aug1.0_1316.1_51276.t1 | 2 | 2 | Ald_Xan_dh_C2 | 228 | 264 | 1.26117e-44 | 152.6 | 4.7e-10 | 7.0e-06 | 24.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1316.1_51276.t1 | gi|156395260|ref|XP_001637029.1| | predicted protein [Nematostella vectensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 13 |
| egg-4cell | 7 |
| 8-16cell | 4 |
| egg-Dshape | 1 |
| trochophore | 2 |
| >Adult tissues | |
| maleGonad | 2 |
| mantle | 4 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1316.1_51276.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1316.1_51276.t1 atgcatcggatgcagcatctgacctacattttccgcttgaaggatcattttggagctgtatcagccgcaggggccgtgaa ggtgacctacactgaccaacagccacccatactgacattagaggagggcatcaaacagaaatcattcttccctggtgttg gtgaagaaatcacagttggcgatgctgaaggtgccatacagaaatcagcagtgaaagtgactgggaggatatctatggga catcagtatcacatgcacatggagacacagatcaccatctgtacaccgacggaggacgggtatgacgtacagacatccac acagtgggtagacaactgtcagaaagccataggaatggtcctagggatacctgactgtaggataaacatcaaggtgaaga gattgggaggagcgtatggagggaaaataacacgtaactttattgtggctgctgctacagcacttggtgcacaggctaca aacagatctgtaaggatggagatggactttcacactaacatgaagatgcttggtaaacgtgtaccatggctggctgatta cgaggttggtgtatctgaagatggcatactacagggtgtcaaaatgacatactacaatgactgtggcaataatcctaatg aaaacagtctacctcctaattgtgatatggggcttgaaaatggatcatgtcccaccatttttatcatggagtcagtgatg gaacatgtagctaagatgttaaatatggaccctacagaattcagaatcaaaaatctataccagaaaggacagcattacta tgatagttttttgtgtcgcctgcgaagcatagcgacacttagggatcactttgtccgttgtccgtctgtccatctgtccg tccgtctgtccgtctgtctgtctgtcacactttgggtgtcacagcccataacttttgattgatgcgccggcaacggtaga gaaagtacagcagctctgtatggtcgatccatcgcagtttgttatatagacatttggtaa |
|
Protein
| Protein ID | pfu_aug1.0_1316.1_51276.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1316.1_51276.t1 MHRMQHLTYIFRLKDHFGAVSAAGAVKVTYTDQQPPILTLEEGIKQKSFFPGVGEEITVGDAEGAIQKSAVKVTGRISMG HQYHMHMETQITICTPTEDGYDVQTSTQWVDNCQKAIGMVLGIPDCRINIKVKRLGGAYGGKITRNFIVAAATALGAQAT NRSVRMEMDFHTNMKMLGKRVPWLADYEVGVSEDGILQGVKMTYYNDCGNNPNENSLPPNCDMGLENGSCPTIFIMESVM EHVAKMLNMDPTEFRIKNLYQKGQHYYDSFLCRLRSIATLRDHFVRCPSVHLSVRLSVCLSVTLWVSQPITFDXCAGNGR ESTAALYGRSIAVCYIDIW |
|