Gene
| Gene Model ID | pfu_aug1.0_1316.1_51279 |
|---|---|
| Locus | scaffold1316.1 : 115069 ... 123855 : - |
| To GenomeBrowser | scaffold1316.1:115069..123855 |
| Genes list of scaffold | scaffold1316.1 |
| Synonym | pfu_aug2.0_383.1_10703 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1316.1_51279.t1 | 1 | 1 | Neur_chan_LBD | 82 | 284 | 9.7e-40 | 136.0 | 2.8026e-43 | 1.4e-39 | 135.4 |
| pfu_aug1.0_1316.1_51279.t1 | 2 | 1 | Neur_chan_memb | 295 | 416 | 5.4e-16 | 59.2 | 1.1e-19 | 5.4e-16 | 59.2 |
| pfu_aug1.0_1316.1_51279.t1 | 2 | 2 | Neur_chan_memb | 418 | 450 | 5.4e-16 | 59.2 | 0.03 | 150.0 | 2.1 |
Transcript
| Transcript ID | pfu_aug1.0_1316.1_51279.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1316.1_51279.t1 atggatcttgtcgccacagtcagtcagaatgcaattcttaagaatgcgctggtacaaggctgtagattggtccagtacca agccaagtgtccatctggtgacagaaggagcatatccatggcacaaaaggcatttgatgtttctaacacaatttcaatga gtctattcttgtggctgaataacatttttatacttttcaacaacaggattatctatggatgcaagacgatccaatccgca tataatttgtacaatgatttattggccaattatacatcagatatcagacctgttgacgatgacaacgatattcttaatgt gaaaacaactatgtacctcaacagtattttagaactggacgaaccaagaggacaacttaccacggctttatccatccatt tgatgtggaatgacatacaattgagttggaatccagctgactacgaatatcgcggcaaaattgagatttctaagagacat atatggactcctgaattaatgatgatatcacctagtaagtcaacagaaaagatcggtaaagacaacgataaagttctgat tcacagttacggtggaagtcatcagtttctatccatgacaatcattgatatattttatactatatgtgacattgatgtta cgtactttccatttgatacacagacttgttcaataagattttcacagtatgactatggagacaggatccgatatgttatt tcagaagacgcgatgaatacagattacttttctgagaatggtgtttggagagttgagaaaacagaggtatatactgaaac aaggaacgaaatatattatgaactcgtaggaaaaatacacatgaaaagacgatcaacatattactgcttaaatcttctcg gccctatcctgatattgatgcttctaaactgcttggtgtttttgttacccgctgagagcggagaacgcgttggttttgca gtcacaattcttcttgccatagctgtatatatgacaatcatagcagacaaattaccaaatacatccaaaccagtctcagt tcttacgttcattcttgcaacatacatggctcagtcggcgatgatatgtgtctgtacaatatttggcatacggttagttt ttcgagacgaatcgaagcctgtttcgaagatatggagcatgttctttctgattatgaaatgtggtagatttcgaatcgca aatgaggatgatgagcacgaagatgtcaagattgatacgaaagagcaatgtcaccaggaaatcacctggaagacagttgc tgaaatgtatgatactgtggtcctctcgattaatctcttcttttgcttcttcattgccattgtttattttataattgttt tgtcaaatatgtag |
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Protein
| Protein ID | pfu_aug1.0_1316.1_51279.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1316.1_51279.t1 MDLVATVSQNAILKNALVQGCRLVQYQAKCPSGDRRSISMAQKAFDVSNTISMSLFLWLNNIFILFNNRIIYGCKTIQSA YNLYNDLLANYTSDIRPVDDDNDILNVKTTMYLNSILELDEPRGQLTTALSIHLMWNDIQLSWNPADYEYRGKIEISKRH IWTPELMMISPSKSTEKIGKDNDKVLIHSYGGSHQFLSMTIIDIFYTICDIDVTYFPFDTQTCSIRFSQYDYGDRIRYVI SEDAMNTDYFSENGVWRVEKTEVYTETRNEIYYELVGKIHMKRRSTYYCLNLLGPILILMLLNCLVFLLPAESGERVGFA VTILLAIAVYMTIIADKLPNTSKPVSVLTFILATYMAQSAMICVCTIFGIRLVFRDESKPVSKIWSMFFLIMKCGRFRIA NEDDEHEDVKIDTKEQCHQEITWKTVAEMYDTVVLSINLFFCFFIAIVYFIIVLSNM |
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