Gene
| Gene Model ID | pfu_aug1.0_1317.1_15430 |
|---|---|
| Locus | scaffold1317.1 : 24835 ... 37235 : - |
| To GenomeBrowser | scaffold1317.1:24835..37235 |
| Genes list of scaffold | scaffold1317.1 |
| Synonym | pfu_aug2.0_202.1_07148 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1317.1_15430.t1 | 1 | 1 | rve | 504 | 607 | 7.4e-18 | 64.8 | 3.1e-21 | 1.6e-17 | 63.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1317.1_15430.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1317.1_15430.t1 atgattcgtgatcgaatagtctttggcgtcacatccgagaaagttcgggagaagctaataaatgtagatgaagcacttac gttagacaaagctgtcgaaatcgctcaatcatatgaatactcgcaacagcaactgaagcagatgatgggagacgcacaca aaaacgaacaagccgtttccaaatggaaaggaaaacctccaggtagcagtcaccctaccgcatccagtaaaccgttatat caatgtacacagaatacaggtgcgcgtccgaaagagtaccaaaatgctaaacgttccagattccgtcaaaatggaggaaa caaggccaaagaaaaagaaaagaaaacctgcgaaagatgtggccgcaaccacaaaccaaccgacaagtgtccagcgatgg gtgaaatttgtgtaaagtgcaataagccaaatcatttcgctgtaatgtgcaaaagcaaaaatgttcatgatgtagaatca gatatgtcacatgcatatttatccgtagatgatgattcagattatgatgtctttattgattctgttgagtcaaagtcatg tcacaaattagttaatgatcaagcctttgtacatgttaaactaggaaatgcaaatgatttcaagtttaaagtggacacag gttcacaagtcaatatcttacctgagaatcaatatgagaaatactttggtcaacattatgcattggaggaatctgacctt aatctatatgcatacaatggtcattcattatcaccatctggttgtgtcactattccatgtacacatagcaatgttacgac tatgcttgaatttcaggttattgacactaagtcttaccccatcttaggactcagagcttgtttagatctgaaattagtta agttaacttacaatgtcgaagtgacaaatcggacagagcctttcacaaaggagaaggttctaaggaatcacgtgtctgtc ttcacaggtaccatcttgatgtgccaagtgtgccactttgtccctggtaaacaaataccagtagcagataccctgtcaag gaaatcacttcctgacacttacccagaactttccaaaaatatggaagcccaagtgcacagtgtaattgcgcaacatggca taagtgaccagcgtttagaggacttaaggtcgtccacagccctaaatgagcaacttcaaagtctaaaaaaggtcatatta caaggatggccccatgagagaaggatgtgctcccctgaaacccttgagtattggaaccatagagatgaactcacatatgc agaaggtttcatcctgaagggtcagaagattgtaatacctcatgaccaaaggtcagaaattctaaggtcaatacatacag gtcacctcggtatagacaaatgcctaaaatgtctattttggcccggtatgaattcagagataaccaaactagtctcatct tgctctgtatgtcaagaacatagaaacacaaacctcaaggaacctatgattcctagtgtcaccccagactacccttggca aatagttgccacagatctattcacattggactgcaaagaacacatcatagttgtagactattacagtcgatactttgaag tcattgaactggcgagcacccaaagcaaggtcatcattcagaaacttaaaagtgtgtttgctcgttttggcatacctgag aaacttgtatcagacaatggaccacagtattcctcagctgaatttgcaaaggattacaactttcagcacactacttcgag cccccactatgctcagtcaaatggactagcagaaagatgtgttcaaactgccaaaagaatcctcaaaaaggcaaagattg accaccaggacccctatctagccttgctagcctatcgcacaactccttcagagaatggctactcgccagctgaactattg caaggtcgcattattcgcactacagtaccaatcttgcctagtcaattgttacccaggacaattaacattaataaggtcaa ggccaaacactatgacaaaggtttttgtgctgcagtattcggagtcaccttcttcgcattgttcatcttgttcataagaa tgaagttactgagaaatgaagctggtaatacaatatacaaggcaacgtcataccaaggatacgacattgacacagtcggt tactacacgaatgactgcattttcaacgttgatgacatttcttctccaaatttggaagtagccccgaaagaagaaaccac agcatgtgtttattgcggatcacggatacaacattttgttatagagcagagagataagaatttaaatgagaaatatcatt tgatataa |
|
Protein
| Protein ID | pfu_aug1.0_1317.1_15430.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1317.1_15430.t1 MIRDRIVFGVTSEKVREKLINVDEALTLDKAVEIAQSYEYSQQQLKQMMGDAHKNEQAVSKWKGKPPGSSHPTASSKPLY QCTQNTGARPKEYQNAKRSRFRQNGGNKAKEKEKKTCERCGRNHKPTDKCPAMGEICVKCNKPNHFAVMCKSKNVHDVES DMSHAYLSVDDDSDYDVFIDSVESKSCHKLVNDQAFVHVKLGNANDFKFKVDTGSQVNILPENQYEKYFGQHYALEESDL NLYAYNGHSLSPSGCVTIPCTHSNVTTMLEFQVIDTKSYPILGLRACLDLKLVKLTYNVEVTNRTEPFTKEKVLRNHVSV FTGTILMCQVCHFVPGKQIPVADTLSRKSLPDTYPELSKNMEAQVHSVIAQHGISDQRLEDLRSSTALNEQLQSLKKVIL QGWPHERRMCSPETLEYWNHRDELTYAEGFILKGQKIVIPHDQRSEILRSIHTGHLGIDKCLKCLFWPGMNSEITKLVSS CSVCQEHRNTNLKEPMIPSVTPDYPWQIVATDLFTLDCKEHIIVVDYYSRYFEVIELASTQSKVIIQKLKSVFARFGIPE KLVSDNGPQYSSAEFAKDYNFQHTTSSPHYAQSNGLAERCVQTAKRILKKAKIDHQDPYLALLAYRTTPSENGYSPAELL QGRIIRTTVPILPSQLLPRTININKVKAKHYDKGFCAAVFGVTFFALFILFIRMKLLRNEAGNTIYKATSYQGYDIDTVG YYTNDCIFNVDDISSPNLEVAPKEETTACVYCGSRIQHFVIEQRDKNLNEKYHLI |
|