Gene
| Gene Model ID | pfu_aug1.0_13181.1_53912 |
|---|---|
| Locus | scaffold13181.1 : 9386 ... 24591 : + |
| To GenomeBrowser | scaffold13181.1:9386..24591 |
| Genes list of scaffold | scaffold13181.1 |
| Synonym | pfu_aug2.0_553.1_10920 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13181.1_53912.t1 | 2 | 1 | G-patch | 83 | 97 | 1.1e-08 | 34.6 | 0.058 | 860.0 | -0.2 |
| pfu_aug1.0_13181.1_53912.t1 | 2 | 2 | G-patch | 126 | 170 | 1.1e-08 | 34.6 | 7.9e-13 | 1.2e-08 | 34.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13181.1_53912.t1 | gi|115631654|ref|XP_781373.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-Dshape | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_13181.1_53912.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13181.1_53912.t1 atgtccttcgtttgtagtagctcttcatcaactactttcatcaccttaagtttacattttatttacagtgactgtacatt ggatttaattgcgtctgaatctaatgacgtcacaattactttacgtcacataccgtcccgaacgggaaattttgatgagc agacggcagatgactgggatgttgacatgagtatatactatgagaaaggtgccggtgataaagacgctagggactatgtc accatgcgtcaggaacagcggagacgtgatggtgtggaagccacggaccgatataccgcaggaatcgcacggaaaagggg aaaaccatcggcagcagagaccagtgaagggatagggaagtttgaacaatactcgaaaggtgtgggtcgtaaaatcatgg agaaacaaggatggacggagggagaggggctaggatcaacaattaaagggatgagtgatgcattagaaaatgagggacag aatccaacagacaaatcaggttttggctacagaggagagaaacttataagacactcgataaagaaaccaaggacagctga caaagatgttattatatctacgaaatacgacaaaccgtcggaaacggaccctcctgaaccgttactacgtagacatgaac cgtaccacatcacatatagacataaagtggacttccaacctcagaaagatacacaagactga |
|
Protein
| Protein ID | pfu_aug1.0_13181.1_53912.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13181.1_53912.t1 MSFVCSSSSSTTFITLSLHFIYSDCTLDLIASESNDVTITLRHIPSRTGNFDEQTADDWDVDMSIYYEKGAGDKDARDYV TMRQEQRRRDGVEATDRYTAGIARKRGKPSAAETSEGIGKFEQYSKGVGRKIMEKQGWTEGEGLGSTIKGMSDALENEGQ NPTDKSGFGYRGEKLIRHSIKKPRTADKDVIISTKYDKPSETDPPEPLLRRHEPYHITYRHKVDFQPQKDTQD |
|