Gene
| Gene Model ID | pfu_aug1.0_13191.1_03325 |
|---|---|
| Locus | scaffold13191.1 : 1 ... 22382 : + |
| To GenomeBrowser | scaffold13191.1:1..22382 |
| Genes list of scaffold | scaffold13191.1 |
| Synonym | pfu_aug2.0_1.1_03331 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13191.1_03325.t1 | 2 | 1 | Meckelin | 74 | 575 | 0.0 | 345.1 | 0.0 | 0.0 | 338.4 |
| pfu_aug1.0_13191.1_03325.t1 | 2 | 2 | Meckelin | 598 | 621 | 0.0 | 345.1 | 0.00033 | 4.8 | 4.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13191.1_03325.t1 | gi|260797905|ref|XP_002593941.1| | hypothetical protein BRAFLDRAFT_98238 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_13191.1_03325.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13191.1_03325.t1 gtttatcgtcctaactttatttatttcggtcaaatgtcaagaagaatatacaccatatgttgtccctactgattgtcaag aaggagcggtttatgcccaatattttagtacctcgttcatggcttgcaggaattgtcctgagccaaaaacgagcatgtcg gtccaagatggtgttaccttgaatactccatgtgacttgtacactgatatagctcagacggttgttggacagtggtgtaa ccgtaatactccatgtgacttgtacactgatatagctcagacggttgttggacagtgctcagacagttgttggacagcgg tgagtaacatgtgcattctgtcgtactaccgttatgattcaggtgcaaccttgaatactccatgtgacttgcacactgat atatctcagttggttgctggacagtggtcctccaccactcgtacaaaaccgtacctgccatggctatattacttcagtag cagtttaagtatacgtgacggtgatcgtgttatcggagaggacgggttaaccacgtcctatacgtttgatccaaaatcac agttcaagttcagggtcggcagatttacgctcaatggtacatatttgggtatatcaaacgtagggagtggattgctacag ctgtgtacagatactacaaataaactggatgctgcatatacctttggaacatactactctcacacatgtaccattccagc tattgacctatgggacaggactcgatatcctctggagttctatgatttatctgatggtgaaaatcagttatactatatac ctatcagatttacagactttgagtttactggagataatgtgaatgcaggttccaatgcccaggattggtacatgacaaga aggctcttcttggttgataatgtagcttctactggagactcgggcacagctgatcaaccacagtatgtgaggtatgccag gaacatagagattactgtccgcttgtttgattcactcggtaatggtcgtatttaccctccatattggacagtatcgtatg gggaaatatcaagagcagatgcagaagcaggagctacaataagtccgaccttcactgtgaaatactccatgagcctgagt gaataccgaaggaatttccagattgccacaggaacgttgtcaactcttggtgtgatctatgccgggtataaaacctgggt gtggtctaagagggctggtagactagctattgactttgccagtatcgggaattttattttcttcgtcagtggagtgctgt ctaacgtcttctttgttataacgtttggtataggattctacttccttgttttcttcaagaggcagagtacagtttatcta ttcctgttagagggtacagcatacgaggaatggctggggttgttcggagcagcattcgcccttaaggcattacaggtcat acacatggtcgtaacacagtgtatggttgatatattctttattgattgggaaaaacctaaaccaggtgtgagcaacaaag gagatcagaaaaaagaaaaccctgtatcaatatggaggacatattttgttgccaacgagtggaacgagcttcagacgtca cgtaaaatcaaccagattttccagatttttgccgtcgtatttttccttaattacatcggctttgagaacgtggcaaccaa ggatccgaatggtaaagtcgtcaaatctgatgaggattaccaggctgaccaggatccgaacatcggtgggggtgggccag gagctgccggtggaaagaaaggtggattgacagagaaacaagtggacgcttataatgtcatcaataaatttctctcctcc ttcataaatcatgtcaatattgatattcacagtacatgtaattcgtataccctgtttatggcttga |
|
Protein
| Protein ID | pfu_aug1.0_13191.1_03325.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13191.1_03325.t1 FIVLTLFISVKCQEEYTPYVVPTDCQEGAVYAQYFSTSFMACRNCPEPKTSMSVQDGVTLNTPCDLYTDIAQTVVGQWCN RNTPCDLYTDIAQTVVGQCSDSCWTAVSNMCILSYYRYDSGATLNTPCDLHTDISQLVAGQWSSTTRTKPYLPWLYYFSS SLSIRDGDRVIGEDGLTTSYTFDPKSQFKFRVGRFTLNGTYLGISNVGSGLLQLCTDTTNKLDAAYTFGTYYSHTCTIPA IDLWDRTRYPLEFYDLSDGENQLYYIPIRFTDFEFTGDNVNAGSNAQDWYMTRRLFLVDNVASTGDSGTADQPQYVRYAR NIEITVRLFDSLGNGRIYPPYWTVSYGEISRADAEAGATISPTFTVKYSMSLSEYRRNFQIATGTLSTLGVIYAGYKTWV WSKRAGRLAIDFASIGNFIFFVSGVLSNVFFVITFGIGFYFLVFFKRQSTVYLFLLEGTAYEEWLGLFGAAFALKALQVI HMVVTQCMVDIFFIDWEKPKPGVSNKGDQKKENPVSIWRTYFVANEWNELQTSRKINQIFQIFAVVFFLNYIGFENVATK DPNGKVVKSDEDYQADQDPNIGGGGPGAAGGKKGGLTEKQVDAYNVINKFLSSFINHVNIDIHSTCNSYTLFMA |
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